Gene omics information

Query gene ID At4g39180
Gene name SEC14
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g39180830073SEC14encodes a protein that complements the function of a sec14(ts) mutant of S. cerevisiaeS.X.H.G.
0.7184.2At5g20390832161beta-1,3-glucanase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POBS.X.H.G.
0.4761.2At2g21990816735unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.4050.8At1g01980839296ATSEC1Amember of Reticuline oxidase-like familyS.X.H.G.
0.4050.8At1g23350838944invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.4050.8At2g05850815137scpl38 (serine carboxypeptidase-like 38)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBS.X.H.G.
0.3643.6At2g47340819347invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:unknown;PFOBS.X.H.G.
0.2726.2At1g17540838328kinaseF:kinase activity;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.2217.5At5g48140834866polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAS.X.H.G.
0.2014.4At1g66210842936subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOMFAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
216.7100.0E-MEXP-1138-raw-cel-1432773162
187.7100.0GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
181.6100.0GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
173.6100.0E-MEXP-1138-raw-cel-1432772554
171.4100.0E-MEXP-1138-raw-cel-1432772650
165.1100.0E-MEXP-1138-raw-cel-1432772522
163.799.9E-MEXP-1138-raw-cel-1432772682
157.699.9E-MEXP-1138-raw-cel-1432772586
157.299.9E-MEXP-1138-raw-cel-1432773194
156.999.9GSM154503Arabidopsis desiccated mature pollen grains rep1GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
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Homologous genes



Paralogous genes



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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.470676At2g21540816693SFH3 (SEC14-LIKE 3)F:phosphatidylinositol transporter activity;P:flower development, transport;C:intracellular;MPFOC.G.S.X.
0.389e-78291At4g34580829610COW1 (CAN OF WORMS1)Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth.C.G.S.X.
0.337e-29129At2g18180816331SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeF:transporter activity;P:transport;C:unknown;MPFOC.G.S.X.
0.283e-28127At4g36490829801SFH12 (SEC14-LIKE 12)F:phosphatidylinositol transporter activity, transporter activity;P:transport;C:unknown;MPFOC.G.S.X.
0.111e-1275At2g21520816691transporterF:transporter activity;P:transport;C:intracellular;MPFOC.G.S.X.
0.201e-1275At2g16380816135SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinF:transporter activity;P:transport;C:intracellular;MPFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.265e-46186Glycine maxGmaAffx.89158.1.A1_atCK605958--4e-44At2g21540SFH3 (SEC14-LIKE 3)C.G.S.X.
0.092e-654Hordeum vulgareContig7871_s_atContig7871--1e-9At1g75370SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putativeC.G.S.X.
0.142e-1275Oryza sativaOs02g04409009630.m02277-Phosphatidylinositol transfer-like protein II3e-28At2g18180SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeC.G.S.X.
0.283e-47190Populus trichocarpaPtpAffx.204603.1.S1_atpmrna9040hypothetical protein-4e-49At4g36490SFH12 (SEC14-LIKE 12)C.G.S.X.
0.061e-1275Triticum aestivumTa.10212.3.S1_atBJ243736--5e-15At2g18180SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeC.G.S.X.
0.067e-548Vitis vinifera1612370_atCB974818hypothetical protein LOC100252199-1e-46At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeC.G.S.X.
0.059e-548Zea maysZm.6096.2.S1_atAJ006545--2e-26At2g21520transporterC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0006656The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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