Gene omics information

Query gene ID At4g39130
Gene name dehydrin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2930.3At4g39130830068dehydrin family proteinF:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMOS.X.H.G.
0.7586.9At4g34510829602KCS17 (3-KETOACYL-COA SYNTHASE 17)Encodes KCS17, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).S.X.H.G.
0.6781.6At3g57510824918ADPG1Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.S.X.H.G.
0.6176.7At4g16730827376lyase/ magnesium ion bindingF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POBS.X.H.G.
0.4457.2At4g13790827013auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus, response to red light, response to far red light;C:unknown;POS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
466.3100.0GSM106915opr3_JA_22 hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
326.2100.0GSM106917opr3_JA_22 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
275.0100.0GSM106916opr3_JA_22 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
256.0100.0GSM106973ws_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
249.1100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
205.6100.0GSM106914opr3_JA_8 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
184.0100.0GSM106912opr3_JA 8hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
172.4100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
158.499.9GSM106913opr3_JA_8 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
147.699.9GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.016e-238At3g60860825257guanine nucleotide exchange family proteinF:binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBC.G.S.X.
0.026e-238At2g02820814812MYB88 (myb domain protein 88)Encodes a putative transcription factor (MYB88), involved in stomata development, double loss of MYB88 and FLP (MYB124) activity results in a failure of guard mother cells (GMCs) to adopt the guard cell fate, thus they continue to divide resulting in abnormal stomata consisting of clusters of numerous guard cell-like cells. This phenotype is enhanced in double mutants over the single mutant flp phenotype.C.G.S.X.
0.019e-134At5g17320831598HDG9 (HOMEODOMAIN GLABROUS 9)Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.C.G.S.X.
0.019e-134At1g69440843276AGO7 (ARGONAUTE7)Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds.C.G.S.X.
0.013e+032At5g03860831690MLS (MALATE SYNTHASE)Encodes a protein with malate synthase activity.C.G.S.X.
0.043e+032At5g65480836673unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PC.G.S.X.
0.033e+032At5g60680836189unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMC.G.S.X.
0.033e+032At5g25170832588unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPOFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Glycine maxGmaAffx.92719.1.S1_s_atCF808444--3e-1At4g39130dehydrin family proteinC.G.S.X.
0.041e-136Hordeum vulgareContig10207_s_atContig10207--4e-5At3g50980XERO1 (DEHYDRIN XERO 1)C.G.S.X.
0.024e-136Oryza sativaOs02g0740900AK108067.1-WD40-like domain containing protein2e-4At1g24130transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.220027.1.S1_atpmrna36278hypothetical protein-2e-6At2g38740haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.041e+130Triticum aestivumTaAffx.58746.1.S1_atCA616596--4e+0At1g35430unknown proteinC.G.S.X.
0.047e-236Vitis vinifera1622639_atCA810871hypothetical protein LOC100254126-1e-4At1g20440COR47 (COLD-REGULATED 47)C.G.S.X.
0.052e+032Zea maysZm.1724.1.S1_atBE512255hypothetical protein LOC100191314-2e-12At3g0963060S ribosomal protein L4/L1 (RPL4A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006950A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
CGO:0009415A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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