Gene omics information

Query gene ID At4g38420
Gene name sks9 (SKU5 Similar 9)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g38420829999sks9 (SKU5 Similar 9)F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOAS.X.H.G.
0.7788.0At1g20520838640unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7687.4At3g09870820145auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:endomembrane system;POS.X.H.G.
0.7184.2At4g37770829933ACS8Encodes an auxin inducible ACC synthase.S.X.H.G.
0.6982.9At2g201422745551transmembrane receptorF:transmembrane receptor activity;P:signal transduction, innate immune response;C:intrinsic to membrane;PS.X.H.G.
0.6478.9At1g30135839893JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6478.9At2g34600818025JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7)F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;PS.X.H.G.
0.5773.8At1g33760840267AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.S.X.H.G.
0.5673.0At1g51620841587protein kinase family proteinF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.4862.5At5g66620836794DAR6 (DA1-RELATED PROTEIN 6)F:zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
520.5100.0E-MEXP-807-raw-cel-1173273088
432.5100.0E-MEXP-807-raw-cel-1173273116
388.4100.0E-MEXP-1443-raw-cel-1581869515
384.8100.0E-MEXP-807-raw-cel-1173273196
338.5100.0E-MEXP-807-raw-cel-1173273223
266.5100.0E-MEXP-807-raw-cel-1173273060
225.7100.0E-MEXP-807-raw-cel-1173273170
209.4100.0E-MEXP-98-raw-cel-320188859
159.899.9E-MEXP-98-raw-cel-320189079
114.499.9E-MEXP-807-raw-cel-1173273144
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.772e-162573At4g28090828925sks10 (SKU5 Similar 10)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAC.G.S.X.
0.151e-21105At1g21850838787sks8 (SKU5 Similar 8)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAC.G.S.X.
0.157e-2099At4g22010828290sks4 (SKU5 Similar 4)F:oxidoreductase activity, copper ion binding;P:unknown;C:membrane, plant-type cell wall;FBPMOAC.G.S.X.
0.114e-1893At1g76160843948sks5 (SKU5 Similar 5)F:oxidoreductase activity, copper ion binding;P:unknown;C:apoplast, cell wall, plant-type cell wall;FBPMOAC.G.S.X.
0.124e-963At1g21860838788sks7 (SKU5 Similar 7)F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOAC.G.S.X.
0.022e-448At1g75790843912sks18 (SKU5 Similar 18)F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAC.G.S.X.
0.029e-446At1g41830840792SKS6 (SKU5-SIMILAR 6)F:pectinesterase activity;P:unknown;C:apoplast, cell wall, membrane, plant-type cell wall;FBPMOAC.G.S.X.
0.031e-242At5g48450834900sks3 (SKU5 Similar 3)Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.C.G.S.X.
0.021e-242At3g13390820539sks11 (SKU5 Similar 11)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.065e-344Glycine maxGma.12550.2.A1_atCD391007--3e-12At1g76160sks5 (SKU5 Similar 5)C.G.S.X.
0.021e-138Hordeum vulgareContig15994_atContig15994--1e-3At4g22010sks4 (SKU5 Similar 4)C.G.S.X.
0.081e-450Oryza sativaOs04g0561900AK070790.1-Multicopper oxidase, type 1 domain containingprotein7e-5At4g38420sks9 (SKU5 Similar 9)C.G.S.X.
0.078e-859Populus trichocarpaPtpAffx.156942.1.S1_atCF230846--1e-38At4g22010sks4 (SKU5 Similar 4)C.G.S.X.
0.079e-446Triticum aestivumTaAffx.114847.1.S1_atBE425942--3e-8At1g21850sks8 (SKU5 Similar 8)C.G.S.X.
0.107e-857Vitis vinifera1622830_atCB923401hypothetical protein LOC100265895-6e-23At1g76160sks5 (SKU5 Similar 5)C.G.S.X.
0.031e+034Zea maysZm.16861.3.S1_atBG901242hypothetical protein LOC100194388-1e-9At3g13390sks11 (SKU5 Similar 11)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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