CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g37770

Gene name ACS8

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.29 30.3 At4g37770 829933 ACS8 Encodes an auxin inducible ACC synthase. S.X. H.G.
0.40 50.8 At3g09870 820145 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:endomembrane system;PO S.X. H.G.
0.33 38.1 At1g33760 840267 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. S.X. H.G.
0.33 38.1 At1g61460 842440 S-locus protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:unknown;MPOBFVA S.X. H.G.
0.28 30.3 At2g27320 817275 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
686.6 100.0 E-MEXP-807-raw-cel-1173273060
602.1 100.0 E-MEXP-807-raw-cel-1173273170
570.0 100.0 E-MEXP-807-raw-cel-1173273116
487.8 100.0 E-MEXP-807-raw-cel-1173273223
483.7 100.0 E-MEXP-807-raw-cel-1173273088
329.5 100.0 E-MEXP-807-raw-cel-1173273196
137.9 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
85.7 99.9 E-MEXP-807-raw-cel-1173273144
48.2 99.8 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
43.3 99.8 E-MEXP-1443-raw-cel-1581869632
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.70 4e-76 286 At2g22810 816812 ACS4 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4) key regulatory enzyme in the biosynthesis of the plant hormone ethylene. ACS4 is specifically induced by indoleacetic acid (IAA). C.G. S.X.
0.51 1e-39 165 At3g49700 824132 ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family. Mutants produce elevated levels of ethylene as etiolated seedlings. C.G. S.X.
0.38 6e-23 109 At5g65800 836709 ACS5 (ACC SYNTHASE 5) 1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition. C.G. S.X.
0.24 1e-11 71 At4g08040 826317 ACS11 encodes an aminotransferase that belongs to ACC synthase gene family structurally C.G. S.X.
0.09 2e-10 67 At4g26200 828726 ACS7 Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. C.G. S.X.
0.10 1e-8 61 At4g11280 826730 ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family C.G. S.X.
0.02 3e-3 44 At5g51690 835243 ACS12 Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. C.G. S.X.
0.06 2e-1 38 At1g01480 837082 ACS2 a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 36 Glycine max Gma.1332.1.S1_x_at BI970666 ACC synthase - 2e-8 At4g11280 ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6) C.G. S.X.
0.04 2e-2 40 Hordeum vulgare Contig21935_at Contig21935 - - 1e+0 At3g49700 ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9) C.G. S.X.
0.02 9e-5 50 Oryza sativa Os03g0727600 M96672.1 - 1-aminocyclopropane-1-carboxylate synthase 1 (EC4.4.1.14) (ACC synthase 1) (S-adenosyl-L-methioninemethylthioadenosine-lyase 1) 1e+0 At5g65800 ACS5 (ACC SYNTHASE 5) C.G. S.X.
0.32 4e-12 73 Populus trichocarpa PtpAffx.207433.1.S1_at pmrna14756 1-aminocyclopropane-1-carboxylate - 1e-30 At3g49700 ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9) C.G. S.X.
0.04 5e-2 40 Triticum aestivum TaAffx.84150.1.S1_at CA643746 - - 1e+0 At3g49700 ACS9 (1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9) C.G. S.X.
0.02 1e-2 40 Vitis vinifera 1611969_at CF513079 - - 2e+0 At5g43401 - C.G. S.X.
0.01 5e+0 32 Zea mays Zm.8134.1.S1_at BM073042 snRK1-interacting protein 1 - 7e+0 At5g53730 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0009693 The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00030 Ethylene biosynthesis from methionine

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00270 Cysteine and methionine metabolism
01070 Biosynthesis of plant hormones
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