Gene omics information

Query gene ID At4g37520
Gene name peroxidase 50 (PER50) (P50) (PRXR2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At4g37520829907peroxidase 50 (PER50) (P50) (PRXR2)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cytoplasm;PFOMS.X.H.G.
0.2217.5At1g09560837482GLP5 (GERMIN-LIKE PROTEIN 5)germin-like protein (GLP5)S.X.H.G.
0.124.9At3g13790820591ATBFRUCT1Encodes a protein with invertase activity.S.X.H.G.
0.124.9At4g20110827757vacuolar sorting receptor, putativeF:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFAS.X.H.G.
0.092.8At4g38540830011monooxygenase, putative (MO2)F:monooxygenase activity;P:metabolic process;C:unknown;BFOPAMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
127.299.9GSM311296Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
55.899.8E-MEXP-711-raw-cel-1563002902
38.699.8E-MEXP-1094-raw-cel-1379507313
35.799.7E-MEXP-711-raw-cel-1563002839
34.399.7GSM291098root - 08% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
34.099.7GSM291124root - 21% oxygen - 48h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
32.199.7GSM128686Underwood_1-39_E.coli-TUV86-2-fliC-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
30.099.7GSM311295Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
29.999.7GSM158702HY213-ESTRADIOL-REP1GSE6954Identification of AGL24 downstream genes by using XVE inducible system
29.599.7E-MEXP-711-raw-cel-1563002768
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.9201372At4g37530829908peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:endomembrane system;PFOC.G.S.X.
0.216e-1685At5g67400836876peroxidase 73 (PER73) (P73) (PRXR11)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOC.G.S.X.
0.033e-550At5g58390835952peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMC.G.S.X.
0.051e-448At5g14130831263peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
0.035e-446At3g32980823067peroxidase 32 (PER32) (P32) (PRXR3)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall, vacuole, membrane;PFOC.G.S.X.
0.072e-344At4g30170829140peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBC.G.S.X.
0.032e-344At3g50990824263electron carrier/ heme binding / peroxidaseF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOC.G.S.X.
0.132e-344At3g49960824158peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.081e-242Glycine maxGmaAffx.50446.1.S1_atBQ080496--3e-10At5g19890peroxidase, putativeC.G.S.X.
0.022e-136Hordeum vulgareContig1861_atContig1861--3e-3At3g49960peroxidase, putativeC.G.S.X.
0.046e-550Oryza sativaOs01g0327100AK070715.1-Haem peroxidase, plant/fungal/bacterial familyprotein5e-2At1g44970peroxidase, putativeC.G.S.X.
0.051e-242Populus trichocarpaPtpAffx.29337.1.A1_atCV283234hypothetical protein-1e-5At3g49960peroxidase, putativeC.G.S.X.
0.041e-138Triticum aestivumTaAffx.24551.1.S1_atCA717515--4e-3At5g39580peroxidase, putativeC.G.S.X.
0.066e-134Vitis vinifera1615967_atCF211449hypothetical protein LOC100266458-2e-5At5g67400peroxidase 73 (PER73) (P73) (PRXR11)C.G.S.X.
0.028e-134Zea maysZm.8774.1.A1_atBM075843--5e+0At5g20100unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00413Link to KaPPA-View 4Peroxidase, class III



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00360Link to KEGG PATHWAYPhenylalanine metabolism
00680Link to KEGG PATHWAYMethane metabolism
00940Link to KEGG PATHWAYPhenylpropanoid biosynthesis
01061Link to KEGG PATHWAYBiosynthesis of phenylpropanoids
01100Link to KEGG PATHWAYMetabolic pathways
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