Gene omics information

Query gene ID At4g37400
Gene name CYP81F3
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9195.6At4g37400829894CYP81F3member of CYP81FS.X.H.G.
0.7788.0At5g57090835813EIR1 (ETHYLENE INSENSITIVE ROOT 1)Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.S.X.H.G.
0.7385.5At1g73160843647glycosyl transferase family 1 proteinF:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:unknown;BOAFPMS.X.H.G.
0.7385.5At2g24610816997ATCNGC14member of Cyclic nucleotide gated channel familyS.X.H.G.
0.6781.6At5g10720830938AHK5 (ARABIDOPSIS HISTIDINE KINASE 5)member of Histidine KinaseS.X.H.G.
0.6176.7At2g30340817584LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13)F:molecular_function unknown;P:biological_process unknown;C:membrane;PMOFVBAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
132.799.9GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
114.799.9GSM133968Birnbaum_1-19_LRC-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
80.299.9GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
75.099.9GSM133969Birnbaum_1-20_LRC-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
67.399.8GSM266662Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
65.499.8GSM266664Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
62.399.8GSM133970Birnbaum_1-21_LRC-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis root
60.499.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
56.199.8GSM265416Arabidopsis, root cells, -Fe, replicate 3GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
52.699.8GSM266670Arabidopsis, root cells, cortex, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.771e-128460At4g37410829895CYP81F4member of CYP81FC.G.S.X.
0.161e-42174At4g374096240256unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.451e-30135At4g37430829897CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2)Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily.C.G.S.X.
0.214e-21103At5g57220835828CYP81F2member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi.C.G.S.X.
0.051e-552At4g37370829891CYP81D8member of CYP81DC.G.S.X.
0.028e-446At2g23220816854CYP81D6member of CYP81DC.G.S.X.
0.015e-240At4g15330827199CYP705A1a member of the cytochrome P450 familyC.G.S.X.
0.045e-240At4g37360829890CYP81D2member of CYP81DC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.054e-344Glycine maxGmaAffx.91351.1.S1_atCF807076--3e-4At4g37370CYP81D8C.G.S.X.
0.032e-240Hordeum vulgareContig17311_atContig17311--4e-1At3g20120CYP705A21C.G.S.X.
0.022e-242Oryza sativaOs03g0702500AK064270.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein1e-2At4g37400CYP81F3C.G.S.X.
0.051e-346Populus trichocarpaPtpAffx.218530.1.S1_atpmrna34184cytochrome P450-1e-2At1g66540cytochrome P450, putativeC.G.S.X.
0.022e-138Triticum aestivumTa.13905.1.A1_atBQ743482--5e+0At3g25660glutamyl-tRNA(Gln) amidotransferase, putativeC.G.S.X.
0.036e-238Vitis vinifera1616862_atCB343429hypothetical protein LOC100250930-1e+0At2g19385zinc ion bindingC.G.S.X.
0.022e-240Zea maysZm.7429.1.A1_atCF635433hypothetical protein LOC100279582-2e-1At4g32285epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00903Link to KEGG PATHWAYLimonene and pinene degradation
00945Link to KEGG PATHWAYStilbenoid, diarylheptanoid and gingerol biosynthesis
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