CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g37260

Gene name MYB73 (MYB DOMAIN PROTEIN 73)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.51 66.3 At4g37260 829880 MYB73 (MYB DOMAIN PROTEIN 73) Member of the R2R3 factor gene family. S.X. H.G.
0.67 81.6 At3g57530 824920 CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32) Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro S.X. H.G.
0.64 78.9 At1g11050 837646 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.63 78.1 At3g16720 820924 ATL2 RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. S.X. H.G.
0.58 73.8 At4g33920 829536 protein phosphatase 2C family protein / PP2C family protein F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:mitochondrion, protein serine/threonine phosphatase complex;PMOFBV S.X. H.G.
0.57 73.8 At5g24590 832530 - - S.X. H.G.
0.56 73.0 At1g70740 843411 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA S.X. H.G.
0.53 68.6 At1g27770 839670 ACA1 (AUTO-INHIBITED CA2+-ATPASE 1) Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor. S.X. H.G.
0.52 67.4 At3g49530 824115 anac062 (Arabidopsis NAC domain containing protein 62) F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;P S.X. H.G.
0.51 66.3 At2g26190 817159 calmodulin-binding family protein F:calmodulin binding;P:N-terminal protein myristoylation;C:unknown;PFOB S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
91.1 99.9 E-MEXP-807-raw-cel-1173273088
89.4 99.9 E-MEXP-807-raw-cel-1173273060
88.9 99.9 E-MEXP-807-raw-cel-1173273116
86.8 99.9 E-MEXP-807-raw-cel-1173273196
74.1 99.9 E-MEXP-807-raw-cel-1173273223
43.6 99.8 E-MEXP-807-raw-cel-1173273170
39.8 99.8 E-MEXP-98-raw-cel-320188749
37.5 99.7 GSM131318 AtGen_6-3322_Saltstress-Roots-3.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
35.8 99.7 E-MEXP-807-raw-cel-1173273252
35.8 99.7 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.51 4e-66 252 At2g23290 816861 AtMYB70 (myb domain protein 70) Member of the R2R3 factor gene family. C.G. S.X.
0.11 7e-34 145 At5g34780 833376 dehydrogenase E1 component family protein Putative ketopantoate reductase (KPR). This enzyme is speculated to be the missing enzyme in the biosynthesis of pantothenate. C.G. S.X.
0.32 2e-21 103 At3g50060 824168 MYB77 Encodes a member of the R2R3 transcription factor gene family. Expressed in response to potassium deprivation and auxin. Involved in lateral root development. Interacts with ARF7 and regulates the expression of some auxin responsive genes. C.G. S.X.
0.31 3e-14 79 At5g67300 836865 MYBR1 (MYB DOMAIN PROTEIN R1) Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli. C.G. S.X.
0.07 2e-6 54 At3g55730 824739 MYB109 (myb domain protein 109) putative transcription factor MYB109 (MYB109) mRNA, C.G. S.X.
0.07 5e-4 46 At3g09230 820079 AtMYB1 (myb domain protein 1) member of MYB3R- and R2R3- type MYB- encoding genes C.G. S.X.
0.03 2e-3 44 At3g49770 824139 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM C.G. S.X.
0.02 3e-2 40 At4g21450 826300 vesicle-associated membrane family protein / VAMP family protein F:structural molecule activity;P:biological_process unknown;C:plasma membrane;MOFPBV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 2e-7 57 Glycine max GmaAffx.58141.1.S1_x_at AW596198 MYB transcription factor MYB178 - 9e-8 At4g37260 MYB73 (MYB DOMAIN PROTEIN 73) C.G. S.X.
0.03 6e-2 38 Hordeum vulgare Contig25984_at Contig25984 - - 9e-1 At4g24380 unknown protein C.G. S.X.
0.03 6e-2 40 Oryza sativa OsAffx.20954.1.A1_at - - - 0 C.G. S.X.
0.35 2e-25 117 Populus trichocarpa PtpAffx.205371.1.S1_at pmrna10638 hypothetical protein - 1e-25 At4g37260 MYB73 (MYB DOMAIN PROTEIN 73) C.G. S.X.
0.05 2e+0 34 Triticum aestivum TaAffx.30423.1.S1_at CA625435 - - 1e+0 At4g37260 MYB73 (MYB DOMAIN PROTEIN 73) C.G. S.X.
0.30 5e-26 117 Vitis vinifera 1622782_at CF605860 hypothetical protein LOC100243698 - 9e-26 At4g37260 MYB73 (MYB DOMAIN PROTEIN 73) C.G. S.X.
0.03 8e-1 34 Zea mays Zm.4064.1.A1_at AI834361 Hypothetical protein LOC100193331 - 2e-1 At3g09700 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0010200 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
X GO:0009723 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.
X GO:0009737 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
X GO:0009751 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
X GO:0009753 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.
X GO:0046686 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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