Gene omics information

Query gene ID At4g36900
Gene name RAP2.10 (related to AP2 10)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g36900829843RAP2.10 (related to AP2 10)encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.10). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.1.S.X.H.G.
0.4355.3At1g27290839618unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.3948.4At1g53580841793GLY3 (GLYOXALASE II 3)F:hydrolase activity, hydroxyacylglutathione hydrolase activity;P:response to salt stress, methylglyoxal catabolic process to D-lactate;C:unknown;BOMAFPS.X.H.G.
0.3643.6At1g32410840134vacuolar protein sorting 55 family protein / VPS55 family proteinF:transporter activity;P:transport;C:vacuole;MFPOS.X.H.G.
0.3541.6At1g76180843950ERD14 (EARLY RESPONSE TO DEHYDRATION 14)Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated.S.X.H.G.
0.3541.6At5g06370830525NC domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBMOS.X.H.G.
0.3541.6At4g19860827730lecithin:cholesterol acyltransferase family protein / LACT family proteinF:phosphatidylcholine-sterol O-acyltransferase activity;P:lipid metabolic process;C:cellular_component unknown;MOPBFAS.X.H.G.
0.3439.8At4g39090830064RD19 (RESPONSIVE TO DEHYDRATION 19)Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R–mediated resistance response.S.X.H.G.
0.3439.8At4g37790829935HAT22Encodes homeobox protein HAT22, member of the HD-Zip II family.S.X.H.G.
0.3439.8At1g15400838110unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
71.699.9GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
59.499.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
50.199.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
48.599.8GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
44.299.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
39.799.8GSM133968Birnbaum_1-19_LRC-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
36.799.7GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
34.499.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
33.899.7GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
32.599.7GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.351e-34147At5g67190836854AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.C.G.S.X.
0.457e-30131At2g23340816866AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.C.G.S.X.
0.146e-24111At4g06746826148RAP2.9 (related to AP2 9)encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.9). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1 and RAP2.10.C.G.S.X.
0.271e-22107At3g50260824188CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.C.G.S.X.
0.205e-1271At1g46768841117RAP2.1 (related to AP2 1)encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.C.G.S.X.
0.083e-756At1g44830841047AP2 domain-containing transcription factor TINY, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.C.G.S.X.
0.082e-550At3g15210820752ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.C.G.S.X.
0.048e-548At1g71130843453AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.C.G.S.X.
0.055e-342At5g11590831031TINY2 (TINY2)encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.182e-1583Glycine maxGma.3202.1.S1_atCD404474--6e-13At3g50260CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)C.G.S.X.
0.031e-136Hordeum vulgareContig26036_atContig26036--4e-3At3g22235-C.G.S.X.
0.081e-552Oryza sativaOs04g0648900AK061095.1-Dehydration responsive element binding protein 2F(DREB2F protein)3e-9At5g67190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.195e-1685Populus trichocarpaPtpAffx.15726.2.S1_atCX180406AP2/ERF domain-containing transcription factor-5e-16At4g36900RAP2.10 (related to AP2 10)C.G.S.X.
0.053e-446Triticum aestivumTaAffx.105718.1.S1_atCA730771--5e-5At1g71130AP2 domain-containing transcription factor, putativeC.G.S.X.
0.197e-1889Vitis vinifera1608315_atCA814287hypothetical protein LOC100245542-3e-17At4g36900RAP2.10 (related to AP2 10)C.G.S.X.
0.032e+032Zea maysZmAffx.1076.1.A1_atAI948113hypothetical protein LOC100279228-3e+0At4g36900RAP2.10 (related to AP2 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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