Gene omics information

Query gene ID At4g36700
Gene name cupin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At4g36700829823cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;MOFBPVAS.X.H.G.
0.9095.1At5g07190830610ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.S.X.H.G.
0.8693.1At1g03890839379cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;PBMOS.X.H.G.
0.8592.4At1g62290842526aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:vacuole;MFOPBS.X.H.G.
0.8491.9At4g271508288232S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.8391.4At4g271708288252S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;POS.X.H.G.
0.8391.4At3g62730825448unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBS.X.H.G.
0.8391.4At4g271408288222S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PMOS.X.H.G.
0.8290.9At3g63040825479unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8290.9At3g60730825244pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
266.1100.0GSM10453WT Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
228.0100.0E-ATMX-1-raw-cel-1112746267
215.0100.0GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
213.6100.0E-ATMX-1-raw-cel-1112746209
206.6100.0GSM131695ATGE_79_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
200.8100.0GSM10451WT Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
195.6100.0GSM131694ATGE_79_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
195.1100.0E-ATMX-1-raw-cel-1112746154
194.1100.0GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
186.0100.0GSM131696ATGE_79_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.122e-1791At2g18540816369cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;MOBFPVAC.G.S.X.
0.015e-240At3g21720821726ICL (ISOCITRATE LYASE)Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).C.G.S.X.
0.028e-136At4g21920828281unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PC.G.S.X.
0.018e-136At3g26680822280SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage.C.G.S.X.
0.028e-136At3g29280822585unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.028e-136At3g05730819742-Encodes a defensin-like (DEFL) family protein.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Glycine maxGmaAffx.43710.1.S1_atAW306402--1e-5At3g01890SWIB complex BAF60b domain-containing proteinC.G.S.X.
0.022e+034Hordeum vulgareContig8666_atContig8666--1e-30At3g10420sporulation protein-relatedC.G.S.X.
0.013e-242Oryza sativaOs07g0540100AK101714.1-Receptor protein kinase1e-3At4g05200protein kinase family proteinC.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.225800.1.S1_x_atpmrna45402hypothetical protein-1e+0At1g17147-C.G.S.X.
0.021e+132Triticum aestivumTaAffx.86278.1.S1_atCA612312--4e+0At4g09600GASA3 (GAST1 PROTEIN HOMOLOG 3)C.G.S.X.
0.031e-344Vitis vinifera1616578_s_atCB978574hypothetical protein LOC100256465-1e-6At2g18540cupin family proteinC.G.S.X.
0.021e+034Zea maysZm.19097.1.A1_atCO519732hypothetical protein LOC100216571-1e+0At5g55240caleosin-related family protein / embryo-specific protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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