Gene omics information

Query gene ID At4g36490
Gene name SFH12 (SEC14-LIKE 12)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7989.1At4g36490829801SFH12 (SEC14-LIKE 12)F:phosphatidylinositol transporter activity, transporter activity;P:transport;C:unknown;MPFOS.X.H.G.
0.8994.6At2g23900816922glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOMAS.X.H.G.
0.8994.6At2g18470816362protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAS.X.H.G.
0.8693.1At5g20410832163MGD2Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.S.X.H.G.
0.8491.9At1g55560842005sks14 (SKU5 Similar 14)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAS.X.H.G.
0.8391.4At1g14420838004AT59F:lyase activity, pectate lyase activity;P:plant-type cell wall organization;C:endomembrane system;PBFOS.X.H.G.
0.8391.4At3g54800824645pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing proteinF:phosphoinositide binding;P:signal transduction;C:unknown;POMS.X.H.G.
0.8391.4At5g50830835155unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OMFBPVAS.X.H.G.
0.8190.4At2g26410817181Iqd4 (IQ-domain 4)F:calmodulin binding;P:unknown;C:unknown;PMOBVFAS.X.H.G.
0.8190.4At2g13350815821C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
150.399.9GSM142739DH001_ATH1_A6-TCP2GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
124.199.9GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7101080At2g18180816331SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeF:transporter activity;P:transport;C:unknown;MPFOC.G.S.X.
0.342e-63244At2g21540816693SFH3 (SEC14-LIKE 3)F:phosphatidylinositol transporter activity;P:flower development, transport;C:intracellular;MPFOC.G.S.X.
0.332e-32141At4g34580829610COW1 (CAN OF WORMS1)Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth.C.G.S.X.
0.263e-28127At4g39180830073SEC14encodes a protein that complements the function of a sec14(ts) mutant of S. cerevisiaeC.G.S.X.
0.223e-22107At2g21520816691transporterF:transporter activity;P:transport;C:intracellular;MPFOC.G.S.X.
0.152e-1791At2g16380816135SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinF:transporter activity;P:transport;C:intracellular;MPFOC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.303e-29131Glycine maxGmaAffx.89158.1.S1_atCK605958--4e-44At2g21540SFH3 (SEC14-LIKE 3)C.G.S.X.
0.067e-1581Hordeum vulgareContig7871_s_atContig7871--1e-9At1g75370SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putativeC.G.S.X.
0.202e-1895Oryza sativaOs10g01226009638.m00247-Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein1e-18At4g36490SFH12 (SEC14-LIKE 12)C.G.S.X.
0.415e-77289Populus trichocarpaPtpAffx.207383.1.S1_atpmrna14642hypothetical protein-6e-94At2g18180SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeC.G.S.X.
0.081e-242Triticum aestivumTa.27363.1.S1_atBT008962.1--6e-6At2g18180SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeC.G.S.X.
0.092e-550Vitis vinifera1612370_atCB974818hypothetical protein LOC100252199-1e-46At4g39170SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeC.G.S.X.
0.152e-654Zea maysZm.6096.2.S1_atAJ006545--2e-26At2g21520transporterC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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