CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g36110

Gene name auxin-responsive protein, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At4g36110 829768 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO S.X. H.G.
0.08 2.3 At5g16440 831505 IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway. S.X. H.G.
0.04 0.9 At3g60520 825223 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.01 0.2 At1g18400 838421 BEE1 (BR Enhanced Expression 1) F:transcription factor activity;P:regulation of transcription;C:nucleus;PFMO S.X. H.G.
0.01 0.2 At1g27930 839686 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB S.X. H.G.
0.00 0.0 At4g09460 826530 ATMYB6 Encodes myb6 DNA-binding protein. S.X. H.G.
0.00 0.0 At4g14560 827103 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE) auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein. S.X. H.G.
0.00 0.0 At4g16360 827331 AMP-activated protein kinase F:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOB S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
636.1 100.0 GSM67087 Arabidopsis_Stigma03 GSE3056 Arabidopsis Pollination Study
383.1 100.0 GSM67086 Arabidopsis_Stigma02 GSE3056 Arabidopsis Pollination Study
67.4 99.8 GSM128733 Hennig_1-5_flowers-CK_021114_2_B_Rep2_ATH1 GSE5526 Transcriptional Programs of Early Reproductive Stages in Arabidopsis
65.5 99.8 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
62.9 99.8 GSM133969 Birnbaum_1-20_LRC-2_Rep2_ATH1 GSE5749 A gene expression map of the Arabidopsis root
62.9 99.8 GSM25877 IAA/B Treated - 2 GSE1491 Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
57.2 99.8 GSM62696 Columbia flowers_stage 13-14 GSE2848 Auxin Response Factor mediated flower gene expression
55.3 99.8 GSM131609 ATGE_43_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
46.2 99.8 E-MEXP-285-raw-cel-440783335
46.1 99.8 GSM131611 ATGE_43_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.40 1e-17 89 At1g75580 843893 auxin-responsive protein, putative F:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;PO C.G. S.X.
0.26 3e-15 81 At4g34760 829628 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO C.G. S.X.
0.35 7e-13 73 At1g19830 838570 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO C.G. S.X.
0.48 7e-10 63 At2g18010 816313 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO C.G. S.X.
0.17 7e-10 63 At2g16580 816158 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO C.G. S.X.
0.05 4e-2 38 At1g75590 843894 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO C.G. S.X.
0.07 1e-1 36 At5g18020 831669 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO C.G. S.X.
0.22 1e-1 36 At5g66260 836758 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO C.G. S.X.
0.06 1e-1 36 At4g34800 829632 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 6e-8 57 Glycine max GmaAffx.38425.1.S1_at BE820839 - - 9e-8 At4g36110 auxin-responsive protein, putative C.G. S.X.
0.05 5e+0 30 Hordeum vulgare Contig23377_s_at Contig23377 - - 9e+0 At4g36110 auxin-responsive protein, putative C.G. S.X.
0.04 3e-1 36 Oryza sativa Os.8639.1.S1_at - - - 0 C.G. S.X.
0.14 3e-3 42 Populus trichocarpa PtpAffx.46365.2.S1_at CK097760 SAUR family protein - 2e-5 At4g34760 auxin-responsive family protein C.G. S.X.
0.08 4e-2 38 Triticum aestivum Ta.18651.1.S1_at CA640076 - - 6e-2 At4g36110 auxin-responsive protein, putative C.G. S.X.
0.08 1e-2 38 Vitis vinifera 1619874_at CB004955 - - 7e-3 At2g16580 auxin-responsive protein, putative C.G. S.X.
0.04 2e+1 28 Zea mays ZmAffx.948.1.A1_at AI833407 - - 5e-2 At3g13350 high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0009733 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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