Gene omics information

Query gene ID At4g36010
Gene name pathogenesis-related thaumatin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.135.8At4g36010829757pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOVS.X.H.G.
0.2217.5At4g18280827554glycine-rich cell wall protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownS.X.H.G.
0.2217.5At5g62520836372SRO5 (SIMILAR TO RCD ONE 5)Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.S.X.H.G.
0.071.9At1g11210837662unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;POS.X.H.G.
0.051.1At5g17850831653cation exchanger, putative (CAX8)F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
184.1100.0E-MEXP-1443-raw-cel-1581869745
174.7100.0E-MEXP-1443-raw-cel-1581869803
154.999.9E-MEXP-1725-raw-cel-1669614634
89.799.9E-MEXP-1725-raw-cel-1669614623
84.899.9GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
76.799.9E-MEXP-98-raw-cel-320189024
66.699.8GSM131275AtGen_6-1511_Cold(4°C)-Shoots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
65.999.8E-MEXP-98-raw-cel-320188804
61.499.8GSM131272AtGen_6-1412_Cold(4°C)-Shoots-6.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
54.899.8GSM131276AtGen_6-1512_Cold(4°C)-Shoots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.503e-36153At2g17860816296pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVC.G.S.X.
0.176e-22105At1g75800843913pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVAC.G.S.X.
0.095e-1375At4g38660830022thaumatin, putativeF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PFMBOVC.G.S.X.
0.123e-1169At1g20030838592pathogenesis-related thaumatin family proteinF:molecular_function unknown;P:response to other organism;C:anchored to membrane;PMFBOVC.G.S.X.
0.128e-961At1g75050843843-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVC.G.S.X.
0.125e-756At1g75040843842PR5 (PATHOGENESIS-RELATED GENE 5)Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.C.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.126e-446Glycine maxGmaAffx.59879.1.S1_atBM520465--2e-9At1g75030ATLP-3C.G.S.X.
0.036e-238Hordeum vulgareContig10686_s_atContig10686--4e-8At4g24180-C.G.S.X.
0.142e-861Oryza sativaOs09g05363009637.m03081-Thaumatin, pathogenesis-related family protein9e-9At4g36010pathogenesis-related thaumatin family proteinC.G.S.X.
0.101e-861Populus trichocarpaPtpAffx.125862.1.A1_atDN493272--8e-9At4g36010pathogenesis-related thaumatin family proteinC.G.S.X.
0.052e-344Triticum aestivumTaAffx.67423.1.S1_atBQ805669--2e-3At1g75050-C.G.S.X.
0.082e-342Vitis vinifera1606517_atCB347191hypothetical protein LOC100247111-5e-5At1g20030pathogenesis-related thaumatin family proteinC.G.S.X.
0.045e-238Zea maysZm.12137.1.S1_atCO524051thaumatin-like protein 1-2e-1At4g36010pathogenesis-related thaumatin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0051707A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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