Gene omics information

Query gene ID At4g35520
Gene name MLH3 (MUTL PROTEIN HOMOLOG 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g35520829704MLH3 (MUTL PROTEIN HOMOLOG 3)DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossoversS.X.H.G.
0.5570.6At1g48390841259syntaxin-related family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5267.4At2g42370818838unknown proteinF:unknown;P:unknown;C:cellular_component unknown;MOPBFAS.X.H.G.
0.4963.5At4g03380827946-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4659.8At2g28610817410PRS (PRESSED FLOWER)Encodes a homeodomain containing protein that regulates lateral axis-dependent development of Arabidopsis flowers and is required for cell proliferation. It is expressed in a restricted number of L1 cells at the lateral regions of flower primordia, floral organ primordia, and young leaf primordia.S.X.H.G.
0.4659.8At1g49940841417-F:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.4558.3At3g61730825346unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.4558.3At1g54700841911-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PS.X.H.G.
0.4457.2At1g10710837614-Computational predictions suggested the presence of a small cysteine-rich protein beginning in intron 9 (Silverstein 2007), but subsequent analysis revealed that this region contains a tenth exon for the At1g10710 gene.S.X.H.G.
0.4457.2At4g18490827581unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
398.8100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
367.4100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
332.6100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
307.8100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
305.2100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
287.8100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
287.0100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
248.7100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
234.8100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
223.7100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-140At2g19620816481Ndr family proteinF:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MBPOC.G.S.X.
0.011e-140At1g21480838746exostosin family proteinF:catalytic activity;P:biological_process unknown;C:Golgi apparatus, membrane;PMOBFC.G.S.X.
0.014e-138At2g03730814900ACR5Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding.C.G.S.X.
0.014e-138At1g19835838571unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPAVC.G.S.X.
0.012e+036At5g22670832330F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMC.G.S.X.
0.012e+036At4g32300829365SD2-5 (S-DOMAIN-2 5)F:carbohydrate binding, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.012e+036At4g14200827060unknown proteinF:unknown;P:biological_process unknown;C:unknown;MBOFPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-138Glycine maxGma.3027.1.A1_atBM270824--3e+0At3g04200germin-like protein, putativeC.G.S.X.
0.012e-138Hordeum vulgareHV04B19u_atHV04B19u--9e-1At5g55507hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.013e+036Oryza sativaOsAffx.31980.1.S1_at---0C.G.S.X.
0.073e-965Populus trichocarpaPtpAffx.149777.1.A1_a_atCV229416hypothetical protein-7e-10At4g35520MLH3 (MUTL PROTEIN HOMOLOG 3)C.G.S.X.
0.015e-138Triticum aestivumTaAffx.112914.1.S1_atCA619852--1e-12At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.012e+034Vitis vinifera1621623_atCF208039hypothetical protein LOC100253665-2e-2At3g25011unknown proteinC.G.S.X.
0.013e-344Zea maysZm.2764.1.S1_atAW067132--5e+0At3g22950ATARFC1 (ADP-ribosylation factor C1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0007131The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.
CGO:0006298A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
03430Link to KEGG PATHWAYMismatch repair
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