CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g35500

Gene name protein kinase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.77 88.0 At4g35500 829702 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVA S.X. H.G.
0.63 78.1 At3g61590 825332 HWS (HAWAIIAN SKIRT) F:ubiquitin-protein ligase activity;P:organ development;C:cellular_component unknown;P S.X. H.G.
0.59 74.7 At1g61770 842474 DNAJ heat shock N-terminal domain-containing protein J domain protein. S.X. H.G.
0.57 73.8 At2g17530 816260 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVA S.X. H.G.
0.53 68.6 At1g14560 838018 mitochondrial substrate carrier family protein F:transporter activity, binding;P:transport, mitochondrial transport;C:endomembrane system, mitochondrial inner membrane, membrane;MFPO S.X. H.G.
0.52 67.4 At1g08030 837318 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB S.X. H.G.
0.51 66.3 At1g69330 843265 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPO S.X. H.G.
0.51 66.3 At1g06890 837199 transporter-related F:unknown;P:unknown;C:Golgi apparatus, membrane;PMFOBA S.X. H.G.
0.51 66.3 At1g15490 838119 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOPMFA S.X. H.G.
0.50 65.3 At1g18150 838394 ATMPK8 ATMPK8, S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
78.8 99.9 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
63.8 99.8 GSM184923 Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt
54.6 99.8 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.1 99.8 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
48.0 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
47.6 99.8 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
46.1 99.8 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
44.4 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
42.8 99.8 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
40.9 99.8 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.79 1e-171 603 At2g17530 816260 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVA C.G. S.X.
0.09 4e-5 50 At3g44850 823619 protein kinase-related F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVA C.G. S.X.
0.01 3e-3 44 At3g17750 821043 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MOPFBVA C.G. S.X.
0.01 4e-2 40 At5g53550 835437 YSL3 (YELLOW STRIPE LIKE 3) F:oligopeptide transporter activity;P:oligopeptide transport, response to nematode;C:unknown;BPFOAV C.G. S.X.
0.08 4e-2 40 At5g22840 832347 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVA C.G. S.X.
0.02 4e-2 40 At4g32780 829414 phosphoinositide binding F:phosphoinositide binding;P:signal transduction;C:cellular_component unknown;OPBMVFA C.G. S.X.
0.02 2e-1 38 At5g55893 835686 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 1e-12 75 Glycine max Gma.3439.1.S1_at AW351200 - - 5e-13 At4g35500 protein kinase family protein C.G. S.X.
0.07 2e-5 50 Hordeum vulgare Contig11374_at Contig11374 - - 2e-5 At2g17530 protein kinase family protein C.G. S.X.
0.04 6e-9 63 Oryza sativa Os07g0472400 AK105684.1 - Protein kinase family protein 1e-6 At2g17530 protein kinase family protein C.G. S.X.
0.28 4e-46 186 Populus trichocarpa Ptp.3664.1.S1_at BU836355 hypothetical protein - 2e-37 At2g17530 protein kinase family protein C.G. S.X.
0.04 3e-12 73 Triticum aestivum Ta.14122.1.S1_at BQ166287 - - 1e-35 At3g53030 SRPK4 (Ser/Arg-rich protein kinase 4) C.G. S.X.
0.38 7e-26 117 Vitis vinifera 1609578_at CF372299 hypothetical protein LOC100247401 - 5e-27 At2g17530 protein kinase family protein C.G. S.X.
0.04 1e-12 73 Zea mays Zm.2704.1.S1_a_at AW066934 - - 2e-44 At3g44850 protein kinase-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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