CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g35300

Gene name TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At4g35300 829684 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity;P:in 6 processes;C:plasma membrane, vacuole, membrane;BFMPOA S.X. H.G.
0.29 30.3 At3g62700 825444 ATMRP10 member of MRP subfamily S.X. H.G.
0.25 22.6 At1g43620 840946 UDP-glucose:sterol glucosyltransferase, putative F:transferase activity, transferring glycosyl groups;P:lipid glycosylation, carbohydrate metabolic process, metabolic process;C:plasma membrane, vacuole;BMFPOV S.X. H.G.
0.25 22.6 At1g75370 843873 SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative F:transporter activity;P:transport;C:plasma membrane;MPFO S.X. H.G.
0.04 0.9 At2g19860 816505 HXK2 (HEXOKINASE 2) Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
35.1 99.7 GSM142629 MC002_ATH1_A3.1-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
30.9 99.7 GSM133309 RIKEN-NAKABAYASHI4B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
27.4 99.7 E-TABM-52-raw-cel-1583683438
23.3 99.6 GSM142866 GW001_ATH1_A11-Warre-6ca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
23.0 99.6 GSM142869 GW001_ATH1_A14-Warre-3ca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
22.9 99.6 GSM142865 GW001_ATH1_A10-Warre-Wca GSE6177 The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
22.5 99.6 GSM142623 MC002_ATH1_A1.1-dubos-wtx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
22.4 99.6 GSM133307 RIKEN-NAKABAYASHI3A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
21.7 99.6 E-ATMX-32-raw-cel-1562974409
21.3 99.6 E-ATMX-32-raw-cel-1562974595
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.09 2e-23 111 At3g51490 824312 TMT3 (TONOPLAST MONOSACCHARIDE TRANSPORTER3) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity;P:in 6 processes;C:plant-type vacuole membrane, membrane;BFMPOA C.G. S.X.
0.12 3e-19 97 At1g20840 838676 TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1) The protein encoded by this gene is found in the tonoplast (vacuole membrane) of Arabidopsis cells. The gene is expressed at highest levels in juvenile (sink) and adult (source) leaves, followed by flower tissues. C.G. S.X.
0.01 3e-1 38 At4g32551 829390 LUG (LEUNIG) LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors. C.G. S.X.
0.01 3e-1 38 At2g35940 818167 BLH1 (BEL1-LIKE HOMEODOMAIN 1) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 1e-10 69 Glycine max GmaAffx.4467.2.S1_at BQ452979 - - 2e-11 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.14 3e-15 83 Hordeum vulgare Contig3479_at Contig3479 - - 4e-15 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.18 2e-22 109 Oryza sativa Os10g0539900 AK102640.1 - Sugar transporter family protein 1e-22 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.18 4e-7 57 Populus trichocarpa PtpAffx.205287.1.S1_at pmrna10479 hypothetical protein - 3e-7 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.10 3e-13 77 Triticum aestivum Ta.2669.1.S1_a_at CK153809 - - 3e-13 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.14 6e-12 71 Vitis vinifera 1615257_at CB972713 hexose transporter-like - 6e-12 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
0.13 4e-17 89 Zea mays Zm.8068.1.A1_at BM072816 hexose transporter - 6e-17 At4g35300 TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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