Gene omics information

Query gene ID At4g35200
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g35200829673unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMS.X.H.G.
0.6075.7At3g21680821722unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PS.X.H.G.
0.5065.3At5g43030834318DC1 domain-containing proteinF:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOS.X.H.G.
0.4253.9At4g35210829674unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.4152.4At5g12940831134leucine-rich repeat family proteinF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAS.X.H.G.
0.3745.0At2g27010817243CYP705A9member of CYP705AS.X.H.G.
0.3643.6At3g23470821928cyclopropane-fatty-acyl-phospholipid synthaseF:cyclopropane-fatty-acyl-phospholipid synthase activity;P:lipid biosynthetic process;C:endomembrane system;OBFPAMS.X.H.G.
0.3338.1At1g14220837983ribonuclease T2 family proteinF:ribonuclease T2 activity, endoribonuclease activity, RNA binding;P:N-terminal protein myristoylation;C:endomembrane system;PBFMOVS.X.H.G.
0.3338.1At1g80240844364unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PBS.X.H.G.
0.3338.1At1g02430839242ATARFD1B (ADP-ribosylation factor D1B)A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
176.5100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
175.7100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
160.699.9GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
160.199.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
144.899.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
141.999.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
130.999.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
127.799.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
123.099.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
122.599.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.811e-99363At4g35210829674unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.712e-49196At2g17070816212unknown proteinF:molecular_function unknown;P:unknown;C:unknown;PMOBFC.G.S.X.
0.697e-49194At2g17080816213unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMOFBVC.G.S.X.
0.021e-138At4g15880827269ESD4 (EARLY IN SHORT DAYS 4)EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.C.G.S.X.
0.024e-136At3g61440825317CYSC1 (CYSTEINE SYNTHASE C1)Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.C.G.S.X.
0.014e-136At3g19510821485HAT3.1Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.C.G.S.X.
0.024e-136At2g33840817952tRNA synthetase class I (W and Y) family proteinF:tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding;P:translation, tRNA aminoacylation for protein translation, tyrosyl-tRNA aminoacylation;C:cytoplasm;BOMAFPVC.G.S.X.
0.014e-136At1g28350839731ATP binding / aminoacyl-tRNA ligase/ nucleotide binding / tyrosine-tRNA ligaseF:tyrosine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding;P:translation, tyrosyl-tRNA aminoacylation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMAFPVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.056e-446Glycine maxGmaAffx.24809.1.S1_atCA820582--2e-4At4g35200unknown proteinC.G.S.X.
0.033e+032Hordeum vulgarerbaal1f07_s_atrbaal1f07--2e+0At5g53270seed maturation family proteinC.G.S.X.
0.023e+034Oryza sativaOsAffx.18762.1.S1_at---0C.G.S.X.
0.062e-344Populus trichocarpaPtpAffx.204345.1.S1_atpmrna8544hypothetical protein-3e-2At4g35210unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTa.12348.2.S1_atCA733409--1e+0At4g35200unknown proteinC.G.S.X.
0.034e-134Vitis vinifera1611460_atCF203702.1--7e-9At3g01010UDP-glucose/GDP-mannose dehydrogenase family proteinC.G.S.X.
0.033e+032Zea maysZmAffx.170.1.S1_atAI668224--8e-1At1g13245RTFL17 (ROTUNDIFOLIA LIKE 17)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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