Gene omics information

Query gene ID At4g35070
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4355.3At4g35070829659-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPVBFAS.X.H.G.
0.2624.4At3g12600820440atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)F:hydrolase activity;P:unknown;C:unknown;BMPOFS.X.H.G.
0.2522.6At3g14070820622CAX9 (CATION EXCHANGER 9)Involved in cation (K, Na and Mn) homeostasis and transportS.X.H.G.
0.2420.7At2g28590817407protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAS.X.H.G.
0.2319.3At2g17530816260protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVAS.X.H.G.
0.2115.8At1g14530838015THH1 (TOM THREE HOMOLOG 1)F:virion binding;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.2115.8At5g09790830839ATXR5Encodes a SET-domain protein. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.S.X.H.G.
0.2014.4At5g04460830324protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOPFBVS.X.H.G.
0.2014.4At5g58530835966glutaredoxin family proteinF:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:unknown;PMOBFS.X.H.G.
0.2014.4At4g01960828190unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
138.599.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
136.999.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
115.899.9GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
112.799.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
109.499.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
102.499.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.399.9GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
100.499.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
93.099.9E-MEXP-1474-raw-cel-1593932737
87.399.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-446At5g55020835593MYB120 (MYB DOMAIN PROTEIN 120)Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB120).C.G.S.X.
0.024e-446At2g05940815147protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.042e-344At5g61590836280AP2 domain-containing transcription factor family proteinencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.C.G.S.X.
0.022e-344At1g01260839545basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOBC.G.S.X.
0.023e-240At5g42280834233DC1 domain-containing proteinF:unknown;P:unknown;C:unknown;POMC.G.S.X.
0.023e-240At4g39840830143unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFBPVAC.G.S.X.
0.033e-240At4g05100825855AtMYB74 (myb domain protein 74)Member of the R2R3 factor gene family.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Glycine maxHgAffx.17851.1.S1_atCB278539--1e-1At4g35070-C.G.S.X.
0.042e-136Hordeum vulgareContig23137_atContig23137--2e-1At4g35070-C.G.S.X.
0.041e-242Oryza sativaOs11g01253009639.m00226--1e-1At1g67035unknown proteinC.G.S.X.
0.049e-342Populus trichocarpaPtpAffx.153622.1.A1_s_atCV249906hypothetical protein-1e+0At5g59990-C.G.S.X.
0.041e-138Triticum aestivumTaAffx.92519.2.S1_atBJ255733--2e-2At4g21030Dof-type zinc finger domain-containing proteinC.G.S.X.
0.035e-134Vitis vinifera1622301_atBQ796244hypothetical protein LOC100246969-3e-1At3g13500unknown proteinC.G.S.X.
0.037e-134Zea maysZm.7457.1.A1_atBM078465cold shock protein-1-1e+0At5g40645nitrate-responsive NOI protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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