Gene omics information

Query gene ID At4g34970
Gene name ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g34970829649ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)F:actin binding;P:biological_process unknown;C:intracellular;MPOFS.X.H.G.
0.9496.7At1g26680839209transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:chloroplast;POBMS.X.H.G.
0.9095.1At1g04180837024flavin-containing monooxygenase family protein / FMO family proteinF:NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:unknown;BOFMPAS.X.H.G.
0.8894.0At1g04610839474flavin-containing monooxygenase / FMO (YUCCA3)F:oxidoreductase activity;P:auxin biosynthetic process;C:unknown;BOFMPAS.X.H.G.
0.8592.4At1g21340838733Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;POS.X.H.G.
0.8089.8At4g28720828993flavin-containing monooxygenase family protein / FMO family proteinF:oxidoreductase activity, monooxygenase activity;P:unknown;C:unknown;BOFMPAS.X.H.G.
0.7989.1At3g01840820047protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, cell wall macromolecule catabolic process;C:endomembrane system;MPOFBVAS.X.H.G.
0.7788.0At5g57420835848IAA33 (INDOLE-3-ACETIC ACID INDUCIBLE 33)Belongs to auxin inducible gene family.S.X.H.G.
0.7788.0At2g04025814929unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7788.0At4g18450827576ethylene-responsive factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
609.1100.0GSM184893Arabidopsis, root cells, columella root cap, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
597.8100.0GSM184910Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
570.8100.0GSM266668Arabidopsis, root cells, columella root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
537.7100.0GSM184892Arabidopsis, root cells, columella root cap, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
480.1100.0GSM266666Arabidopsis, root cells, columella root cap, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
412.2100.0GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
367.8100.0GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
332.9100.0GSM266667Arabidopsis, root cells, columella root cap, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
288.6100.0GSM184894Arabidopsis, root cells, columella root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
26.799.7GSM184634Arabidopsis, root cells, 140 mM NaCl, replicate 1GSE7636Expression analysis of the effect of protoplasting and FACS sorting in roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.804e-55214At2g16700816171ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)Encodes actin depolymerizing factor 5 (ADF5).C.G.S.X.
0.073e-342At5g52360835312ADF10 (ACTIN DEPOLYMERIZING FACTOR 10)F:actin binding;P:biological_process unknown;C:intracellular;MPOFC.G.S.X.
0.071e-240At5g59880836110ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)Encodes actin depolymerizing factor 3 (ADF3).C.G.S.X.
0.015e-238At4g09980826589EMB1691 (EMBRYO DEFECTIVE 1691)F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity, nucleic acid binding;P:embryonic development ending in seed dormancy;C:unknown;MOBFPVAC.G.S.X.
0.022e-136At3g21000821651unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.428e-1167Glycine maxGma.597.2.S1_atAW621016--9e-11At4g34970ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)C.G.S.X.
0.292e-1271Hordeum vulgareContig5692_s_atContig5692--6e-12At4g34970ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)C.G.S.X.
0.151e-448Oryza sativaOs03g0243100AK104056.1-Actin-depolymerizing factor 5 (ADF-5) (AtADF5)2e-16At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)C.G.S.X.
0.242e-1479Populus trichocarpaPtpAffx.57531.1.A1_atCV264188hypothetical protein-5e-31At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)C.G.S.X.
0.092e-136Triticum aestivumTa.17356.1.S1_atCA619985--1e-1At4g34970ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)C.G.S.X.
0.032e-134Vitis vinifera1620926_atCD011236--1e+0At1g66420transcription regulatorC.G.S.X.
0.184e-1063Zea maysZm.1019.1.A1_atAW288674actin-depolymerizing factor 5-2e-19At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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