Gene omics information

Query gene ID At4g34660
Gene name SH3 domain-containing protein 2 (SH3P2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8491.9At4g34660829618SH3 domain-containing protein 2 (SH3P2)F:clathrin binding;P:biological_process unknown;C:unknown;MOPFBS.X.H.G.
0.5469.5At2g38020818380VCL1 (VACUOLELESS 1)necessary for proper vacuole formation and morphogenesis in ArabidopsisS.X.H.G.
0.5469.5At4g10570826649UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9)encodes a ubiquitin-specific protease family member, UBP9.S.X.H.G.
0.5368.6At4g36630829815EMB2754 (EMBRYO DEFECTIVE 2754)F:small GTPase regulator activity, binding;P:embryonic development ending in seed dormancy;C:cellular_component unknown;MFOPS.X.H.G.
0.5368.6At4g38240829981CGL1 (COMPLEX GLYCAN LESS 1)Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.S.X.H.G.
0.5368.6At3g10380820201SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)Subunit of the Putative Arabidopsis Exocyst ComplexS.X.H.G.
0.5166.3At3g05090819671transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAVS.X.H.G.
0.5166.3At5g35980833590protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol;MOPFBVAS.X.H.G.
0.5065.3At5g43670834387transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPS.X.H.G.
0.5065.3At1g66340842951ETR1 (ETHYLENE RESPONSE 1)Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.598.8GSM142644MC002_ATH1_A8.1-dubos-aihGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
7.498.8GSM142641MC002_ATH1_A7.1-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
7.298.8GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
7.098.7GSM292076Wt, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
7.098.7GSM292081pif1-2, dark sample, biological rep3GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
6.998.7GSM142593DB001_ATH1_A3-Brown-calGSE6148The trans-differentiation of cultured Arabidopsis cells
6.798.7GSM142648MC002_ATH1_A9.2-dubos-aahGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
6.698.7GSM292079pif1-2, dark sample, biological rep1GSE11594Expression data from dark grown Arabidopsis Wild type (Wt, col-o) and pif1-2 (At2g20810, Salk_072677) mutant seedlings
6.698.7GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
6.698.7GSM270865Arabidopsis cell culture, 4 h_control_rep3GSE10719Response of Arabidopsis cell culture to phytoprostane A1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.054e-859At4g18060827531clathrin bindingF:clathrin binding;P:unknown;C:unknown;MOFPBC.G.S.X.
0.079e-652At4g39020830057SH3 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMOFC.G.S.X.
0.014e-240At1g30760839958FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMC.G.S.X.
0.024e-240At1g31440840034SH3 domain-containing protein 1 (SH3P1)F:clathrin binding;P:unknown;C:endomembrane system, plasma membrane;MOBPFVAC.G.S.X.
0.021e-138At2g03640814893nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:transport, nucleocytoplasmic transport;C:intracellular;MFPOBC.G.S.X.
0.025e-136At5g05410830424DREB2AEncodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress–inducible genes.C.G.S.X.
0.015e-136At5g08630830764DDT domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.229e-1685Glycine maxGma.9143.1.A1_s_atCD394216--1e-15At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.163e-1685Hordeum vulgareContig7332_atContig7332--1e-15At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.065e-963Oryza sativaOs10g0512700AK067223.1-SH3 domain-containing protein 33e-9At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.331e-45184Populus trichocarpaPtpAffx.38736.1.S1_a_atCF235217hypothetical protein-6e-46At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.112e-654Triticum aestivumTaAffx.73984.1.S1_atCA679295--1e-6At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.282e-1995Vitis vinifera1612914_atCB343257hypothetical protein LOC100260580-4e-19At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
0.241e-1893Zea maysZm.16276.1.S1_atBQ164449hypothetical protein LOC100273976-3e-18At4g34660SH3 domain-containing protein 2 (SH3P2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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