Gene omics information

Query gene ID At4g34510
Gene name KCS17 (3-KETOACYL-COA SYNTHASE 17)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At4g34510829602KCS17 (3-KETOACYL-COA SYNTHASE 17)Encodes KCS17, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).S.X.H.G.
0.6176.7At4g16730827376lyase/ magnesium ion bindingF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;POBS.X.H.G.
0.3846.7At3g06490819827MYB108 (myb domain protein 108)putative transcription factor MYB108 (MYB108) mRNA,S.X.H.G.
0.3338.1At3g11430820316GPAT5 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5)Encodes a protein with glycerol-3-phosphate acyltransferase activity, involved in the biosynthesis of suberin polyester.S.X.H.G.
0.3338.1At3g57510824918ADPG1Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1085.7100.0GSM106915opr3_JA_22 hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
858.8100.0GSM106916opr3_JA_22 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
833.3100.0GSM106917opr3_JA_22 hrs_Rep3GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
619.3100.0GSM106973ws_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
266.0100.0GSM131591ATGE_36_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
247.4100.0GSM131593ATGE_36_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
239.6100.0GSM131592ATGE_36_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
93.299.9E-ATMX-1-raw-cel-1112746154
73.799.9GSM239254CaMV::DME stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
62.599.8GSM106912opr3_JA 8hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.560640At2g16280816124KCS9 (3-KETOACYL-COA SYNTHASE 9)Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.352e-47190At4g34520829603KCS18Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.323e-43176At1g19440838528KCS4 (3-KETOACYL-COA SYNTHASE 4)Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.262e-22107At2g15090815998KCS8 (3-KETOACYL-COA SYNTHASE 8)Encodes KCS8, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.172e-22107At1g04220839578KCS2 (3-KETOACYL-COA SYNTHASE 2)Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.224e-21103At4g34250829574KCS16 (3-KETOACYL-COA SYNTHASE 16)Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.141e-1791At5g43760834398KCS20 (3-KETOACYL-COA SYNTHASE 20)Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
0.113e-1273At1g01120839395KCS1 (3-KETOACYL-COA SYNTHASE 1)Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.C.G.S.X.
0.098e-1065At1g25450839131KCS5 (3-KETOACYL-COA SYNTHASE 5)Encodes KCS5, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.281e-27125Glycine maxGma.2319.2.S1_atBG653402--9e-37At1g19440KCS4 (3-KETOACYL-COA SYNTHASE 4)C.G.S.X.
0.059e-238Hordeum vulgareContig5663_atContig5663--7e-11At5g43760KCS20 (3-KETOACYL-COA SYNTHASE 20)C.G.S.X.
0.044e-448Oryza sativaOs.25370.1.S1_at---0C.G.S.X.
0.458e-57222Populus trichocarpaPtpAffx.224411.1.S1_x_atpmrna42910hypothetical protein-2e-124At2g16280KCS9 (3-KETOACYL-COA SYNTHASE 9)C.G.S.X.
0.045e-240Triticum aestivumTa.7498.2.A1_a_atCA593590--6e-11At5g43760KCS20 (3-KETOACYL-COA SYNTHASE 20)C.G.S.X.
0.106e-1167Vitis vinifera1615413_atCB972695hypothetical protein LOC100260817-9e-14At1g19440KCS4 (3-KETOACYL-COA SYNTHASE 4)C.G.S.X.
0.021e+034Zea maysZm.8766.1.A1_atBM349453--1e+0At5g58360ATOFP3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0000038The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater.
XGO:0030497The elongation of a fatty acid chain by the sequential addition of two-carbon units.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00040Link to KaPPA-View 4Fatty acid elongation and wax biosynthesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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