Gene omics information

Query gene ID At4g33710
Gene name pathogenesis-related protein, putative
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At4g33710829513pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBOS.X.H.G.
0.8391.4At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.8089.8At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.7687.4At1g08090837327ATNRT2:1 (NITRATE TRANSPORTER 2:1)High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.S.X.H.G.
0.7486.1At4g08620826426SULTR1High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.S.X.H.G.
0.7284.8At5g04730830351unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.6781.6At1g33840840280unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.6781.6At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.5469.5At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAS.X.H.G.
0.5368.6At5g52350835311ATEXO70A3 (exocyst subunit EXO70 family protein A3)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
240.5100.0GSM39200Col_C2GSE2169rre1 and rre2 mutants
233.4100.0GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.852e-110398At5g26130832682-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBC.G.S.X.
0.147e-857At2g14610815949PR1 (PATHOGENESIS-RELATED GENE 1)PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.C.G.S.X.
0.173e-756At4g33720829514pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBC.G.S.X.
0.171e-344At4g07820826263pathogenesis-related protein, putativeF:molecular_function unknown;P:unknown;C:endomembrane system, extracellular region;PMFBOC.G.S.X.
0.016e-238At5g25070832578unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.011e+034At5g08650830766GTP-binding protein LepA, putativeF:GTP binding, translation elongation factor activity, GTPase activity;P:unknown;C:chloroplast;BOMFPAC.G.S.X.
0.021e+034At4g02600828229MLO1A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).C.G.S.X.
0.011e+034At1g0481083940926S proteasome regulatory subunit, putativeF:enzyme regulator activity, binding;P:protein catabolic process, ubiquitin-dependent protein catabolic process;C:proteasome regulatory particle, base subcomplex, nucleus, plasma membrane;MFOPBAC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.059e-238Glycine maxGmaAffx.42847.1.S1_s_atBU578388--5e-12At2g14580ATPRB1C.G.S.X.
0.052e+032Hordeum vulgareHY10O14u_x_atHY10O14u--6e-2At2g47270transcription factor/ transcription regulatorC.G.S.X.
0.028e+032Oryza sativaOs.51169.1.S1_at---0C.G.S.X.
0.066e-652Populus trichocarpaPtpAffx.214404.1.S1_atpmrna28019hypothetical protein-3e-6At3g19690pathogenesis-related protein, putativeC.G.S.X.
0.044e+032Triticum aestivumTa.4637.1.A1_atAY130765.1pyrophosphate-fructose-6-phosphate 1-phosphotransferease-2e+0At4g24026unknown proteinC.G.S.X.
0.052e-238Vitis vinifera1613816_x_atCF074673pathogenesis-related protein-4e-4At2g14610PR1 (PATHOGENESIS-RELATED GENE 1)C.G.S.X.
0.034e-134Zea maysZm.16827.1.A1_atCF752097--3e-1At5g26130-C.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage