Gene omics information

Query gene ID At4g33410
Gene name signal peptide peptidase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g33410829478signal peptide peptidase family proteinF:aspartic-type endopeptidase activity;P:biological_process unknown;C:endomembrane system, integral to membrane;MPOFS.X.H.G.
0.5469.5At1g19080838490TTN10 (TITAN 10)This gene is predicted to encode a PSF3 component of the GINS complex. This complex has been implicated in the initiation of DNA replication in Xenopus. Mutations in this gene cause defects in embryo development.S.X.H.G.
0.4862.5At1g21710838775OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1)Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.S.X.H.G.
0.4659.8At1g08750837397GPI-anchor transamidase, putativeF:GPI-anchor transamidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MPOFABS.X.H.G.
0.4558.3At1g18340838415basal transcription factor complex subunit-relatedF:general RNA polymerase II transcription factor activity;P:DNA repair, regulation of transcription, DNA-dependent;C:core TFIIH complex;MFOPS.X.H.G.
0.4558.3At4g39170830072SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeF:phosphatidylinositol transporter activity, transporter activity;P:transport;C:plasma membrane;MPFOS.X.H.G.
0.4050.8At5g41760834180nucleotide-sugar transporter family proteinF:nucleotide-sugar transmembrane transporter activity, CMP-sialic acid transmembrane transporter activity;P:carbohydrate transport, nucleotide-sugar transport;C:endomembrane system, integral to membrane, Golgi membrane;MOPFS.X.H.G.
0.4050.8At1g55130841956endomembrane protein 70, putativeF:unknown;P:unknown;C:integral to membrane, Golgi apparatus;MPOFBS.X.H.G.
0.3948.4At3g52610824427unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOS.X.H.G.
0.3745.0At4g24880828590unknown proteinF:unknown;P:unknown;C:unknown;MPOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.099.8GSM133755Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
35.699.7GSM133776Lindsey_1-1_globular-apical_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
34.599.7GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
24.599.6GSM133778Lindsey_1-2_globular-apical_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
22.799.6GSM242956Steroid day 1 (day1D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
22.399.6GSM242958Mock day 3 (day3E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
16.299.5GSM242960Steroid day 3 (day3D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
12.399.3GSM242954Mock day 1 (day1E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
11.799.3GSM133779Lindsey_1-5_globular-basal_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
11.199.2GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.044e-240At2g03120814841ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.C.G.S.X.
0.021e-138At1g26450839186beta-1,3-glucanase-relatedF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;OMFPBVAC.G.S.X.
0.012e+034At5g05350830417unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PFC.G.S.X.
0.022e+034At5g59350836054unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.012e+034At5g21930832253PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2)P-Type ATPase, mediates copper transport to chloroplast thylakoid lumen. Required for accumulation of copper-containing plastocyanin in the thylakoid lumen and for effective photosynthetic electron transportC.G.S.X.
0.012e+034At5g19610832081sec7 domain-containing proteinF:ARF guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBC.G.S.X.
0.022e+034At3g63350825510AT-HSFA7Bmember of Heat Stress Transcription Factor (Hsf) familyC.G.S.X.
0.012e+034At3g18370821366ATSYTFF:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.401e-27125Glycine maxGma.6608.1.S1_atBQ610919--1e-27At4g33410signal peptide peptidase family proteinC.G.S.X.
0.205e-652Hordeum vulgareContig8530_atContig8530--1e-5At4g33410signal peptide peptidase family proteinC.G.S.X.
0.021e+036Oryza sativaOs03g0267000AU165294-Low molecular mass heat shock protein Oshsp18.06e-3At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.347e-26119Populus trichocarpaPtpAffx.128057.1.A1_atCV232767hypothetical protein-3e-26At4g33410signal peptide peptidase family proteinC.G.S.X.
0.079e-342Triticum aestivumTa.28540.1.A1_atCA684174--7e-3At4g33410signal peptide peptidase family proteinC.G.S.X.
0.324e-30131Vitis vinifera1611531_atCD713493hypothetical protein LOC100245846-1e-29At4g33410signal peptide peptidase family proteinC.G.S.X.
0.029e-134Zea maysZm.9123.1.A1_atBM347577hypothetical protein LOC100275105-1e+0At5g39620AtRABG1 (Arabidopsis Rab GTPase homolog G1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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