Gene omics information

Query gene ID At4g33140
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g33140829451unknown proteinF:unknown;P:unknown;C:unknown;OBPFVS.X.H.G.
0.6075.7At5g47520834802AtRABA5a (Arabidopsis Rab GTPase homolog A5a)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVAS.X.H.G.
0.5974.7At1g29750839853RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1)Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.S.X.H.G.
0.4457.2At1g05790837088lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:endomembrane system;MPOFBS.X.H.G.
0.3745.0At3g22290821798unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPS.X.H.G.
0.3032.1At5g04110830289DNA topoisomerase II family proteinF:DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding;P:DNA topological change, DNA metabolic process;C:chromosome;BOPMAFVS.X.H.G.
0.2014.4At5g66010836731RNA binding / nucleic acid binding / nucleotide bindingF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOPFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
55.999.8GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
23.999.6GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
21.499.6GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At3g11830820356chaperonin, putativeF:unfolded protein binding, protein binding, ATP binding;P:response to cadmium ion;C:cellular_component unknown;BOMFPAC.G.S.X.
0.015e-136At4g00970827936protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.015e-136At4g23300828429protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.022e+034At3g50820824246PSBO2 (PHOTOSYSTEM II SUBUNIT O-2)Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In Arabidopsis thaliana the PsbO proteins are encoded by two genes: psbO1 and psbO2. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.C.G.S.X.
0.012e+034At3g21650821719serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeF:protein phosphatase type 2A regulator activity;P:signal transduction;C:protein phosphatase type 2A complex;MPOFBAC.G.S.X.
0.012e+034At3g50590824223nucleotide bindingF:nucleotide binding;P:biological_process unknown;C:plasma membrane;MBFOPVC.G.S.X.
0.012e+034At2g29080817456ftsh3 (FtsH protease 3)encodes an FtsH protease that is localized to the mitochondrionC.G.S.X.
0.022e+034At1g29990839878PDF6 (PREFOLDIN 6)Encodes a cytoplastic protein with similarity to yeast prefoldin6, a subunit of the prefoldin complex. The PFD complex is thought to function along with the TCP ring complex to properly fold microtubule proteins.C.G.S.X.
0.012e+034At1g07510837265ftsh10 (FtsH protease 10)encodes an FtsH protease that is localized to the mitochondrionC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.313e-28127Glycine maxGma.3573.3.S1_atBM270201--1e-28At4g33140unknown proteinC.G.S.X.
0.053e-1065Hordeum vulgareContig11726_atContig11726--9e-10At4g33140unknown proteinC.G.S.X.
0.095e-1583Oryza sativaOs.18144.1.S1_at---0C.G.S.X.
0.181e-1171Populus trichocarpaPtp.2670.1.S1_atCK092079hypothetical protein-7e-12At4g33140unknown proteinC.G.S.X.
0.035e-136Triticum aestivumTaAffx.53871.1.S1_atCA688250--1e+0At5g03400unknown proteinC.G.S.X.
0.309e-28123Vitis vinifera1618094_atCB340258hypothetical protein LOC100261032-3e-27At4g33140unknown proteinC.G.S.X.
0.046e-857Zea maysZm.5278.1.A1_atAI619074tac7077-2e-7At4g33140unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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