Gene omics information

Query gene ID At4g33070
Gene name pyruvate decarboxylase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8089.8At4g33070829444pyruvate decarboxylase, putativeF:in 6 functions;P:unknown;C:membrane;BOFPAMVS.X.H.G.
0.9296.0At4g10270826619wound-responsive family proteinF:molecular_function unknown;P:response to wounding;C:unknown;PS.X.H.G.
0.9296.0At5g39890833986unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
0.8894.0At1g33055840201unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8894.0At4g33560829495unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.8592.4At3g02550821112LBD41 (LOB DOMAIN-CONTAINING PROTEIN 41)F:unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8089.8At4g24110828511unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.7788.0At5g10040830868unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7788.0At2g17850816295-F:molecular_function unknown;P:aging;C:endomembrane system;BOPAMFS.X.H.G.
0.7687.4At5g15120831364unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.299.9GSM218587Pericycle root cells 2hr continuous KNO3 and MSX and Gln treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
78.899.9GSM2454749 hr Hypoxia Stress IP RNA Rep 1GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
76.699.9GSM218595Whole roots 3.5hr KNO3 treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
69.999.9E-MEXP-1797-raw-cel-1669768075
69.299.9GSM184496Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
68.999.9GSM2454849 hr Hypoxia Stress IP RNA Rep 2GSE9719Dynamics of mRNA abundance and translation in response to short and prolonged hypoxia and reoxygenation
64.299.8GSM184522Stele root cells 2hr KCl control treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
62.799.8GSM131294AtGen_6-2322_Osmoticstress-Roots-3.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
62.499.8GSM218592Whole roots 3.5hr KCl control treated then frozen, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
57.199.8GSM290755root - 01% oxygen - 2h - FGSE11558transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8301727At5g01320830867pyruvate decarboxylase, putativeF:in 6 functions;P:unknown;C:cellular_component unknown;BOFPAMVC.G.S.X.
0.8201681At5g01330831414PDC3 (pyruvate decarboxylase-3)pyruvate decarboxylaseC.G.S.X.
0.548e-60232At5g54960835587PDC2 (pyruvate decarboxylase-2)pyruvate decarboxylase-2C.G.S.X.
0.012e-138At5g41780834183myosin heavy chain-relatedF:unknown;P:biological_process unknown;C:unknown;MOBFPAVC.G.S.X.
0.012e-138At1g25560839143TEM1 (TEMPRANILLO 1)Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT.C.G.S.X.
0.019e-136At5g66960836830prolyl oligopeptidase family proteinF:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:membrane;OBMPFAVC.G.S.X.
0.019e-136At2g07020815272protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:unknown;MPOBFVAC.G.S.X.
0.014e+034At5g67250836860SKIP2 (SKP1/ASK1 INTERACTING PROTEIN 2)Encodes an SKP1 interacting partner (SKIP2).Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,2, and 3. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.C.G.S.X.
0.024e+034At5g59305836049unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.432e-27125Glycine maxGma.11273.1.S1_s_atCD396662--2e-66At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.232e-1273Hordeum vulgareContig5532_atContig5532--2e-16At5g01330PDC3 (pyruvate decarboxylase-3)C.G.S.X.
0.312e-1895Oryza sativaOs03g0293500AK119500.1-Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1)(PDC) (Fragment)2e-24At5g01320pyruvate decarboxylase, putativeC.G.S.X.
0.343e-35151Populus trichocarpaPtp.4647.1.S1_atCX175258hypothetical protein-1e-35At4g33070pyruvate decarboxylase, putativeC.G.S.X.
0.237e-1169Triticum aestivumTa.19423.1.S1_a_atCD934753--2e-36At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.289e-26117Vitis vinifera1609684_atCB009168similar to pyruvate decarboxylase-3e-41At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.213e-1789Zea maysZm.10317.1.S1_atAF370003.1pyruvate decarboxylase-6e-33At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00120Link to KaPPA-View 4Phosphoenolpyruvate and Pyruvate metabolism



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00010Link to KEGG PATHWAYGlycolysis / Gluconeogenesis
01100Link to KEGG PATHWAYMetabolic pathways
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