Gene omics information

Query gene ID At4g32500
Gene name AKT5
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8894.0At4g32500829385AKT5member of Stelar K+ outward rectifying channel (SKOR) familyS.X.H.G.
0.9597.0At3g49450824107F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9496.7At5g23480832414DNA bindingF:DNA binding;P:histone modification, transcription initiation;C:nucleus;PS.X.H.G.
0.9496.7At4g39753830132kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBOAVFS.X.H.G.
0.9396.4At1g08600837382ATRXF:helicase activity, DNA binding, nucleic acid binding, ATP binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.9396.4At2g44190819026EDE1 (ENDOSPERM DEFECTIVE 1)Encodes a novel microtubule binding protein that preferentially associates with nuclear microtubules during mitosis and is essential during the mitotic and cytokinetic stages that generate the endosperm and embryo.S.X.H.G.
0.9396.4At5g49150834974GEX2 (GAMETE EXPRESSED 2)Encodes a transmembrane domain containing protein expressed in sperm cells.S.X.H.G.
0.9396.4At4g20500827798transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.9396.4At3g60760825247unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9396.4At3g12060820380unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PBMS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
136.699.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.6101160At2g25600817099SPIK (Shaker Pollen Inward K+ channel)mutant has Impaired pollen-tube growth; member of Shaker K+ channel family, also Stelar K+ outward rectifying channel (SKOR) familyC.G.S.X.
0.131e-1379At2g26650817206AKT1 (ARABIDOPSIS K TRANSPORTER 1)Shaker-like inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis.C.G.S.X.
0.029e-550At4g18290827555KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)One of the four members of the Shaker family encoding guard cell potassium inward channels. Critical to stomatal opening induced by blue light. Critical to circadian rhythm of stomatal opening. Involved in plant development in response to high light intensity. Under high light intensity, the mutant plant produced less biomass compared to the wild type.C.G.S.X.
0.012e-242At2g35710818140glycogenin glucosyltransferase (glycogenin)-relatedF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process, biosynthetic process;C:endomembrane system;PMFOBVC.G.S.X.
0.013e-138At4g23800828480high mobility group (HMG1/2) family proteinF:transcription factor activity;P:unknown;C:nucleus, chloroplast;MOBFPAVC.G.S.X.
0.013e-138At3g23780821960NRPD2AThis gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.C.G.S.X.
0.013e-138At3g18090821334NRPD2bEncodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated.C.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e-344Glycine maxGmaAffx.88688.1.S1_atAF099095.1--8e-27At4g22200AKT2/3 (ARABIDOPSIS POTASSIUM TRANSPORT 2/3)C.G.S.X.
0.036e-136Hordeum vulgareY09748_atY09748potassium channel-3e-11At5g46240KAT1 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 1)C.G.S.X.
0.051e-554Oryza sativaOs01g0648000AK120308.1-Potassium channel3e-20At2g26650AKT1 (ARABIDOPSIS K TRANSPORTER 1)C.G.S.X.
0.194e-29131Populus trichocarpaPtpAffx.206406.1.S1_atpmrna12729hypothetical protein-1e-80At2g26650AKT1 (ARABIDOPSIS K TRANSPORTER 1)C.G.S.X.
0.033e-138Triticum aestivumTa.241.1.S1_atAF207745.1AKT1-like potassium channel-5e-10At2g26650AKT1 (ARABIDOPSIS K TRANSPORTER 1)C.G.S.X.
0.032e-344Vitis vinifera1619157_atAF359521.1inward rectifying shaker-like K+ channel-3e-66At4g18290KAT2 (POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2)C.G.S.X.
0.064e-1169Zea maysZm.249.1.S1_atY07632.1potassium channel-1e-16At2g26650AKT1 (ARABIDOPSIS K TRANSPORTER 1)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006811The directed movement of charged atoms or small charged molecules into, out of, within or between cells.
LGO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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