Gene omics information

Query gene ID At4g32300
Gene name SD2-5 (S-DOMAIN-2 5)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At4g32300829365SD2-5 (S-DOMAIN-2 5)F:carbohydrate binding, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVAS.X.H.G.
0.3338.1At3g02070821202OTU-like cysteine protease family proteinF:cysteine-type peptidase activity;P:biological_process unknown;C:cellular_component unknown;MPOFVS.X.H.G.
0.2217.5At5g43190834337F-box family protein (FBX6)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:unknown;PFOS.X.H.G.
0.114.1At1g19310838513zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVBS.X.H.G.
0.030.6At5g62860836407F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
43.899.8E-ATMX-35-raw-cel-1574334816
35.999.7GSM142852MG001_ATH1_A5-Torres-2N3GSE6176Impact of Type III effectors on plant defense responses
34.999.7E-ATMX-35-raw-cel-1574334832
22.399.6E-MEXP-1443-raw-cel-1581869745
21.499.6GSM142853MG001_ATH1_A6-Torres-2N6GSE6176Impact of Type III effectors on plant defense responses
20.599.6E-ATMX-35-raw-cel-1574334800
18.899.5E-NASC-76-raw-cel-1359878951
17.399.5GSM142643MC002_ATH1_A7.3-dubos-wLhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
16.999.5GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
16.599.5GSM142849MG001_ATH1_A2-Torres-1N3GSE6176Impact of Type III effectors on plant defense responses
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.021e-656At1g49730841396protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.022e-552At3g07070819893protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.028e-550At2g34290817990protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOPFBVAC.G.S.X.
0.028e-550At2g05060815054protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAC.G.S.X.
0.023e-448At3g19300821464protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.033e-448At2g19130816430S-locus lectin protein kinase family proteinF:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAC.G.S.X.
0.025e-344At5g27790832841protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVAC.G.S.X.
0.015e-344At4g29990829122light repressible receptor protein kinaseF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-242Glycine maxGmaAffx.65419.1.S1_atCD405955--1e-6At2g43230serine/threonine protein kinase, putativeC.G.S.X.
0.012e-344Hordeum vulgareContig22567_atContig22567--4e-4At2g19130S-locus lectin protein kinase family proteinC.G.S.X.
0.034e-552Oryza sativaOs04g03020009632.m02192--2e-5At4g32300SD2-5 (S-DOMAIN-2 5)C.G.S.X.
0.201e-25119Populus trichocarpaPtpAffx.225063.1.S1_atpmrna44145hypothetical protein-1e-25At4g32300SD2-5 (S-DOMAIN-2 5)C.G.S.X.
0.021e+036Triticum aestivumTaAffx.12166.1.A1_atBJ285496--9e-5At1g21245wall-associated kinase-relatedC.G.S.X.
0.021e+034Vitis vinifera1612735_atCB976938hypothetical protein LOC100267773-3e-2At3g24540protein kinase family proteinC.G.S.X.
0.026e-446Zea maysZmAffx.905.1.A1_atAI770915--2e-13At1g06700serine/threonine protein kinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0046777The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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