Gene omics information

Query gene ID At4g32250
Gene name protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2217.5At4g32250829358protein kinase family proteinF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAS.X.H.G.
0.6781.6At4g22920828391NYE1 (NON-YELLOWING 1)Similar to the tomato senescence-inducible chloroplast stay-green protein 1. It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves.S.X.H.G.
0.4457.2At1g21410838740SKP2AAtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.S.X.H.G.
0.3338.1At1g72770843609HAB1 (HOMOLOGY TO ABI1)mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2CS.X.H.G.
0.2930.3At3g44880823622ACD1 (ACCELERATED CELL DEATH 1)Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.S.X.H.G.
0.135.8At5g13800831225hydrolase, alpha/beta fold family proteinF:hydrolase activity, pheophytinase activity;P:chlorophyll catabolic process;C:chloroplast;BOPMAFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
93.599.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
76.299.9GSM131537ATGE_25_AGSE5630AtGenExpress: Developmental series (leaves)
73.899.9GSM131539ATGE_25_CGSE5630AtGenExpress: Developmental series (leaves)
70.599.9GSM131538ATGE_25_BGSE5630AtGenExpress: Developmental series (leaves)
65.399.8GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
53.799.8GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
48.799.8GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
48.699.8GSM268245dor-drought-1, biological rep 1GSE10643Transcription profiling of Arabidopsis dor mutant and wild-type plants in response to drought stress.
47.099.8GSM131603ATGE_41_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
46.599.8GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.053e-22107At4g32230829356unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e-138At3g13160820505pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:mitochondrion, membrane;POMFBAC.G.S.X.
0.019e-136At5g17680831634disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.019e-136At5g44510834478TAO1 (TARGET OF AVRB OPERATION1)Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB.C.G.S.X.
0.019e-136At1g68750843206ATPPC4Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.C.G.S.X.
0.019e-136At1g19630838550CYP722A1member of CYP722AC.G.S.X.
0.014e+034At5g58820835999subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-138Glycine maxGmaAffx.80214.1.S1_atAW394888--1e+0At5g53710unknown proteinC.G.S.X.
0.012e+034Hordeum vulgareHVSMEn0005A08f_atHVSMEn0005A08f--1e+0At3g12480NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11)C.G.S.X.
0.038e-654Oryza sativaOs06g0639500AK068750.1-Protein kinase domain containing protein5e-6At4g32250protein kinase family proteinC.G.S.X.
0.106e-963Populus trichocarpaPtpAffx.249.451.S1_atCA823664hypothetical protein-2e-9At4g32250protein kinase family proteinC.G.S.X.
0.021e+036Triticum aestivumTaAffx.86868.1.S1_atCA599592--1e+1At5g42200zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.027e-238Vitis vinifera1606768_atCF413626hypothetical protein LOC100268161-6e-1At5g67520adenylylsulfate kinase, putativeC.G.S.X.
0.026e+032Zea maysZmAffx.181.1.A1_atAI668330--8e-1At5g25640-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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