Gene omics information

Query gene ID At4g32170
Gene name CYP96A2
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At4g32170829349CYP96A2member of CYP96AS.X.H.G.
0.8994.6At4g21630828250subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAMS.X.H.G.
0.5773.8At3g58780825047SHP1 (SHATTERPROOF 1)One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.S.X.H.G.
0.5773.8At4g09960826586STK (SEEDSTICK)a MADS box transcription factor expressed in the carpel and ovulesS.X.H.G.
0.5773.8At5g60140836136transcriptional factor B3 family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;BOMFPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
776.3100.0GSM311284Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
733.7100.0GSM311283Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
721.4100.0GSM311285Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
685.8100.0GSM284398Arabidopsis GGSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
215.8100.0GSM284397Arabidopsis GGSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
215.3100.0GSM311286Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
212.9100.0GSM147964WT Globular Stage Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
176.2100.0GSM147966lec1-1 Globular Stage Seed 2GSE1051Seed development in LEAFY COTYLEDON1 mutants
134.099.9GSM147963WT Globular Stage Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
93.599.9GSM147965lec1-1 Globular Stage Seed 1GSE1051Seed development in LEAFY COTYLEDON1 mutants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.797e-180630At4g39500830104CYP96A11member of CYP96AC.G.S.X.
0.586e-57222At4g39510830105CYP96A12member of CYP96AC.G.S.X.
0.524e-55216At5g02900831752CYP96A13member of CYP96AC.G.S.X.
0.141e-24115At1g57750842150CYP96A15 (CYTOCHROME P450 96 A1)Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis.C.G.S.X.
0.376e-23109At1g47620841171CYP96A8member of CYP96AC.G.S.X.
0.276e-1479At2g23180816850CYP96A1member of CYP96AC.G.S.X.
0.239e-1375At2g21910816727CYP96A5member of CYP96AC.G.S.X.
0.204e-1273At4g39480830103CYP96A9 (CYTOCHROME P450 96 A9)member of CYP96AC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Glycine maxGma.5385.2.S1_atBG237865--4e+0At5g16870aminoacyl-tRNA hydrolaseC.G.S.X.
0.022e+034Hordeum vulgareEBpi05_SQ004_B11_atEBpi05_SQ004_B11--4e+0At3g44740ATP binding / aminoacyl-tRNA ligase/ glycine-tRNA ligase/ nucleotide bindingC.G.S.X.
0.016e+034Oryza sativaOs05g04679009633.m03643--4e-2At5g42780AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)C.G.S.X.
0.052e-242Populus trichocarpaPtp.5355.1.S1_atBU863329cytochrome P450 /// cytochrome P450-2e-5At1g47620CYP96A8C.G.S.X.
0.023e+034Triticum aestivumTaAffx.93469.1.S1_atBJ209493--1e+0At4g32170CYP96A2C.G.S.X.
0.112e-756Vitis vinifera1618164_atCD800719hypothetical protein LOC100260973-3e-7At4g32170CYP96A2C.G.S.X.
0.025e+032Zea maysZm.9728.1.A1_atBM350445--6e+0At4g16160mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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