CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g31970

Gene name CYP82C2

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.57 73.8 At4g31970 829327 CYP82C2 member of CYP82C S.X. H.G.
0.40 50.8 At2g30750 817626 CYP71A12 (cytochrome P450, family 71, subfamily A, polypeptide 12) putative cytochrome P450 S.X. H.G.
0.20 14.4 At1g66690 842987 S-adenosyl-L-methionine:carboxyl methyltransferase family protein F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMF S.X. H.G.
0.17 10.2 At3g55790 824745 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPBOFV S.X. H.G.
0.17 10.2 At5g38910 833883 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOB S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
510.6 100.0 GSM131377 AtGen_6-5521_Genotoxicstress-Roots-12.0h_Rep1 GSE5625 AtGenExpress: Stress Treatments (Genotoxic stress)
340.2 100.0 E-MEXP-1784-raw-cel-1661573005
276.1 100.0 E-MEXP-1784-raw-cel-1661573018
258.3 100.0 E-MEXP-1784-raw-cel-1661572992
144.0 99.9 GSM142884 CW001_ATH1_A1.3-WestC-kuu GSE6178 Mechanisms of DNA double strand break repair in Arabidopsis non-homologous end joining mutants
126.4 99.9 GSM131382 AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2 GSE5625 AtGenExpress: Stress Treatments (Genotoxic stress)
124.8 99.9 GSM291023 root - 08% oxygen - 30min - G GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
108.7 99.9 GSM291124 root - 21% oxygen - 48h - F GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
95.7 99.9 GSM184555 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
93.3 99.9 GSM231199 chl1 at T0, biological rep1 GSE9148 Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.93 0 2222 At4g31940 829324 CYP82C4 member of CYP82C C.G. S.X.
0.92 0 1616 At4g31950 829325 CYP82C3 member of CYP82C C.G. S.X.
0.02 2e-4 48 At2g05180 815066 CYP705A6 member of CYP705A C.G. S.X.
0.02 8e-4 46 At1g13110 837868 CYP71B7 member of CYP71B C.G. S.X.
0.02 3e-3 44 At4g15380 827204 CYP705A4 member of CYP705A C.G. S.X.
0.02 3e-3 44 At3g20080 821548 CYP705A15 member of CYP705A C.G. S.X.
0.02 3e-3 44 At3g26330 822237 CYP71B37 putative cytochrome P450 C.G. S.X.
0.01 5e-2 40 At4g15350 827201 CYP705A2 member of CYP705A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Glycine max GmaAffx.80728.1.S1_at BE059811 - - 5e-2 At2g43018 CPuORF17 (Conserved peptide upstream open reading frame 17) C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HVSMEg0015I17f_at HVSMEg0015I17f - - 4e-1 At1g50490 UBC20 (ubiquitin-conjugating enzyme 20) C.G. S.X.
0.01 2e+0 36 Oryza sativa Os12g0512800 9640.m03197 - Cytochrome P450 71E1 (EC 1.14.13.68)(4-hydroxyphenylacetaldehyde oxime monooxygenase) 3e+0 At5g49280 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.12 2e-14 81 Populus trichocarpa PtpAffx.221147.1.S1_at pmrna37785 cytochrome P450 - 1e-14 At4g31940 CYP82C4 C.G. S.X.
0.02 8e-1 36 Triticum aestivum TaAffx.79887.1.S1_at CA706659 - - 8e-1 At1g44160 DNAJ chaperone C-terminal domain-containing protein C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1621942_at CB977466 - - 6e-2 At3g63290 unknown protein C.G. S.X.
0.02 5e+0 32 Zea mays ZmAffx.1515.1.S1_at 11990232-54 - - 4e-24 Atcg00760 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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