Gene omics information

Query gene ID At4g31960
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6982.9At4g31960829326unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7687.4At1g32390840132transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.7284.8At1g65120842819ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;OPMFBVS.X.H.G.
0.6982.9At5g37640833742UBQ9polyubiquitin gene with 4 ubiquitin repeats. The first ubiquitin repeat has 16 amino acid replacements.S.X.H.G.
0.6478.9At2g43730818975lectin-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6075.7At1g50680841490AP2 domain-containing transcription factor, putativeF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POVS.X.H.G.
0.6075.7At5g03980830277GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:glycerol biosynthetic process, lipid metabolic process;C:endomembrane system;PBMOS.X.H.G.
0.5974.7At1g43600840944NLI interacting factor (NIF) family proteinF:phosphoprotein phosphatase activity;P:biological_process unknown;C:nucleus;MOFPVS.X.H.G.
0.5974.7At2g24000816934scpl22 (serine carboxypeptidase-like 22)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBS.X.H.G.
0.5873.8At1g02540839516unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFVBPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
432.8100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
431.8100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
422.0100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
308.8100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
305.5100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
289.0100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
244.7100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
233.8100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
214.7100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
214.3100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.084e-238At1g54720841913early-responsive to dehydration protein-related / ERD protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e-136At5g07940830688-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPAC.G.S.X.
0.012e-136At5g07970830691dentin sialophosphoprotein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPFC.G.S.X.
0.037e-134At1g69810843317WRKY36member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.017e-134At1g04580839488AAO4 (ARABIDOPSIS ALDEHYDE OXIDASE 4)Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.C.G.S.X.
0.017e-134At1g65200842827ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;PMOFBC.G.S.X.
0.017e-134At1g10900837633phosphatidylinositol-4-phosphate 5-kinase family proteinF:1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process;C:plasma membrane;OMBPFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+034Glycine maxGma.13458.1.A1_atCD398733--1e+0At4g31960unknown proteinC.G.S.X.
0.041e+032Hordeum vulgareHVSMEm0001O16r2_atHVSMEm0001O16r2--3e-1At4g16165Expressed proteinC.G.S.X.
0.031e+034Oryza sativaOs01g03001009629.m01898--1e-4At5g19730pectinesterase family proteinC.G.S.X.
0.069e-134Populus trichocarpaPtpAffx.214983.1.S1_s_atpmrna28919hypothetical protein-3e-1At4g31960unknown proteinC.G.S.X.
0.043e+032Triticum aestivumTaAffx.98141.1.A1_atBG607866--1e+0At4g34770auxin-responsive family proteinC.G.S.X.
0.048e-132Vitis vinifera1622843_s_atCF212102--6e-2At1g11785unknown proteinC.G.S.X.
0.045e+030Zea maysZmAffx.224.1.A1_atAI670233--8e-1At5g06770KH domain-containing protein / zinc finger (CCCH type) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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