Gene omics information

Query gene ID At4g31940
Gene name CYP82C4
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g31940829324CYP82C4member of CYP82CS.X.H.G.
1.00100.0At4g19690827713IRT1 (iron-regulated transporter 1)Fe(II) transport protein (IRT1)S.X.H.G.
0.8994.6At1g74770843816protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFVBS.X.H.G.
0.8089.8At3g58810825050MTPA2 (METAL TOLERANCE PROTEIN A2)Member of Zinc transporter (ZAT) family. Contributes to basic cellular Zn tolerance and controls Zn partitioning, particularly under conditions of high rates of Zn influx into the root symplasm. Localizes to the vacuolar membrane.S.X.H.G.
0.7586.9At1g74760---S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
227.8100.0GSM142672SF001_ATH1_A2-Fille-WT-+dexGSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
184.5100.0E-MEXP-635-raw-cel-912819824
169.2100.0E-MEXP-635-raw-cel-912819840
156.999.9GSM142673SF001_ATH1_A3-Fille-ANGR4-12GSE6155Nutritional control of plant development: molecular analysis of the NO3- response pathway in Arabidopsis roots.
131.199.9GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
127.899.9GSM157327Hammond_3-11_Potassium-starved-root_Rep2_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
117.199.9GSM131382AtGen_6-5622_Genotoxicstress-Roots-24.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)
116.599.9GSM157315Hammond_3-5_Potassium-starved-root_Rep1_ATH1GSE6825Differential gene expression patterns in potassium-starved and Caesium-treated plants
115.499.9GSM184930Arabidopsis, whole roots, 140 mM NaCl, 1 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
98.499.9GSM184927Arabidopsis, whole roots, 140 mM NaCl, 30 minutes, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.9302204At4g31970829327CYP82C2member of CYP82CC.G.S.X.
0.9201594At4g31950829325CYP82C3member of CYP82CC.G.S.X.
0.028e-446At1g13110837868CYP71B7member of CYP71BC.G.S.X.
0.023e-344At3g26330822237CYP71B37putative cytochrome P450C.G.S.X.
0.021e-242At4g22690828365CYP706A1member of CYP706AC.G.S.X.
0.021e-242At4g22710828367CYP706A2member of CYP706AC.G.S.X.
0.015e-240At5g10610830926CYP81K1member of CYP81KC.G.S.X.
0.015e-240At3g20100821553CYP705A19member of CYP705AC.G.S.X.
0.025e-240At2g05180815066CYP705A6member of CYP705AC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-138Glycine maxGmaAffx.80728.1.S1_atBE059811--5e-2At2g43018CPuORF17 (Conserved peptide upstream open reading frame 17)C.G.S.X.
0.024e-136Hordeum vulgareContig13256_atContig13256--2e+0At1g26210unknown proteinC.G.S.X.
0.012e+036Oryza sativaOs05g0119200AK067943.1-Conserved hypothetical protein3e-2At4g36780transcription regulatorC.G.S.X.
0.152e-1481Populus trichocarpaPtpAffx.221147.1.S1_atpmrna37785cytochrome P450-1e-14At4g31940CYP82C4C.G.S.X.
0.023e+034Triticum aestivumTaAffx.108286.1.S1_atCA690043--4e-1At5g09980PROPEP4 (Elicitor peptide 4 precursor)C.G.S.X.
0.032e-136Vitis vinifera1610739_atCB001884--9e-1At4g31940CYP82C4C.G.S.X.
0.011e+034Zea maysZm.14283.4.S1_atBG841525hypothetical protein LOC100192676-2e-6At5g47570unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00903Link to KEGG PATHWAYLimonene and pinene degradation
00945Link to KEGG PATHWAYStilbenoid, diarylheptanoid and gingerol biosynthesis
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