Gene omics information

Query gene ID At4g31830
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7486.1At4g31830829312unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9296.0At5g01670831701aldose reductase, putativeF:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPAS.X.H.G.
0.8894.0At4g10020826593AtHSD5 (hydroxysteroid dehydrogenase 5)F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAVS.X.H.G.
0.8089.8At3g56350824802superoxide dismutase (Mn), putative / manganese superoxide dismutase, putativeF:superoxide dismutase activity, metal ion binding;P:superoxide metabolic process, removal of superoxide radicals;C:mitochondrion, endomembrane system;BOFMPAVS.X.H.G.
0.7888.6At5g55240835617caleosin-related family protein / embryo-specific protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFOS.X.H.G.
0.7788.0At2g19900816509ATNADP-ME1 (NADP-malic enzyme 1)The malic enzyme (EC encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals.S.X.H.G.
0.7788.0At4g09600826545GASA3 (GAST1 PROTEIN HOMOLOG 3)One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.S.X.H.G.
0.7687.4At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7687.4At2g33520817917-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.7687.4At3g50980824262XERO1 (DEHYDRIN XERO 1)F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
381.3100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
362.3100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
348.0100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
288.3100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
286.0100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
257.3100.0GSM10451WT Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
250.8100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
220.6100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
215.9100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
203.2100.0GSM10454WT Post-Mature Green Seed 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.026e-134At5g63120836432ethylene-responsive DEAD box RNA helicase, putative (RH30)F:helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding;P:unknown;C:unknown;BMOFPAVC.G.S.X.
0.036e-134At4g01940828196NFU1Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU2 and 3 than to NFU4 and 5. Targeted to the chloroplast.C.G.S.X.
0.026e-134At1g68020843130ATTPS6Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.C.G.S.X.
0.016e-134At1g72250843557kinesin motor protein-relatedF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVAC.G.S.X.
0.022e+032At5g25250832596-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAVC.G.S.X.
0.022e+032At5g25260832597-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;BOMFPAVC.G.S.X.
0.022e+032At3g08800820027bindingF:binding;P:biological_process unknown;C:cellular_component unknown;MPOBFC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e+032Glycine maxPsAffx.psMA003xE05f_s_atPsAffx.psMA003xE05f--4e+0At4g31830unknown proteinC.G.S.X.
0.043e-134Hordeum vulgareContig26575_atContig26575--1e+0At4g31830unknown proteinC.G.S.X.
0.044e+032Oryza sativaOs05g02026009633.m00993--5e+0At4g31830unknown proteinC.G.S.X.
0.053e+032Populus trichocarpaPtpAffx.203076.1.S1_atpmrna6088hypothetical protein-2e+0At4g31830unknown proteinC.G.S.X.
0.056e-134Triticum aestivumTa.5286.1.S1_atBJ280150--3e+0At3g20850proline-rich family proteinC.G.S.X.
0.043e+030Vitis vinifera1610055_atCB346192--1e-3At5g50740metal ion bindingC.G.S.X.
0.041e+032Zea maysZmAffx.111.1.A1_atAI665574--3e+0At5g57565protein kinase family proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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