Gene omics information

Query gene ID At4g31800
Gene name WRKY18
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7687.4At4g31800829308WRKY18Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.S.X.H.G.
0.6680.1At5g47220834768ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC boxľdependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.S.X.H.G.
0.6579.6At1g28370839733ERF11 (ERF DOMAIN PROTEIN 11)encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.S.X.H.G.
0.6378.1At1g20310838619unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.6378.1At2g41640818762transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:unknown;PMOBFS.X.H.G.
0.6075.7At1g63750842679ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein bindingF:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVAS.X.H.G.
0.5974.7At3g55840824750-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5974.7At5g61900836311BON1 (BONZAI 1)Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.S.X.H.G.
0.5873.8At3g61190825291BAP1 (BON ASSOCIATION PROTEIN 1)Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis.S.X.H.G.
0.5873.8At3g44260823551CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:response to biotic stimulus, response to wounding, RNA modification;C:nucleus;MPOFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
252.5100.0E-MEXP-807-raw-cel-1173273088
244.0100.0E-MEXP-807-raw-cel-1173273196
194.1100.0E-MEXP-807-raw-cel-1173273116
152.099.9E-MEXP-807-raw-cel-1173273170
150.099.9E-MEXP-807-raw-cel-1173273223
146.899.9E-MEXP-807-raw-cel-1173273060
45.499.8GSM131277AtGen_6-1521_Cold(4┬░C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
43.099.8GSM131278AtGen_6-1522_Cold(4┬░C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
41.099.8E-MEXP-807-raw-cel-1173273252
38.799.8E-MEXP-98-raw-cel-320188804
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.353e-45182At2g25000817039WRKY60Pathogen-induced transcription factor. Forms protein complexes with itself and with WRKY40. Coexpression with WRKY18 or WRKY40 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.C.G.S.X.
0.092e-654At1g80840844423WRKY40Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.C.G.S.X.
0.021e-448At4g04450825775WRKY42member of WRKY Transcription Factor; Group II-bC.G.S.X.
0.022e-344At5g28650832971WRKY74member of WRKY Transcription Factor; Group II-dC.G.S.X.
0.027e-342At5g01900831826WRKY62member of WRKY Transcription Factor; Group IIIC.G.S.X.
0.017e-342At5g56270835726WRKY2WRKY transcription factor 2C.G.S.X.
0.027e-342At2g23320816864WRKY15Encodes WRKY DNA-binding protein 15 (WRKY15).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.077e-1065Glycine maxGma.10818.2.S1_atAW568786WRKY78-8e-23At1g80840WRKY40C.G.S.X.
0.034e+032Hordeum vulgareContig5161_s_atContig5161--9e-3At1g54860unknown proteinC.G.S.X.
0.052e-138Oryza sativaOs09g0417800AK067834.1-DNA-binding WRKY domain containing protein1e-1At2g25000WRKY60C.G.S.X.
0.113e-654Populus trichocarpaPtpAffx.5224.1.A1_atCV276226hypothetical protein-3e-6At4g31800WRKY18C.G.S.X.
0.031e-138Triticum aestivumTaAffx.57758.1.S1_atCA625328--6e-2At4g31800WRKY18C.G.S.X.
0.035e-134Vitis vinifera1619424_atBQ800205hypothetical protein LOC100267695-5e-9At4g23550WRKY29C.G.S.X.
0.022e-136Zea maysZm.16504.2.A1_atCD438012heat shock protein18c-6e+0At1g19910AVA-P2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
XGO:0031347Any process that modulates the frequency, rate or extent of a defense response.
XGO:0050691Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism.
XGO:0042742Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.
XGO:0050832Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
XGO:0009751A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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