Gene omics information

Query gene ID At4g31470
Gene name pathogenesis-related protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At4g31470829274pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBS.X.H.G.
0.6781.6At1g52660841698ATP bindingF:ATP binding;P:defense response, apoptosis;C:unknown;PBOAMS.X.H.G.
0.6781.6At1g63450842651catalyticF:catalytic activity;P:unknown;C:membrane;POMS.X.H.G.
0.5773.8At5g15890831446unknown proteinF:unknown;P:biological_process unknown;C:unknown;PMFOVBAS.X.H.G.
0.5065.3At3g21340821688leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
302.4100.0GSM265423Arabidopsis, root, longitudinal zone 3, standard conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
160.499.9GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
142.999.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
141.599.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
141.599.9GSM266672Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
139.599.9GSM184836Arabidopsis, root, longitudinal zone 3, standard conditions, replicate 6GSE7639Expression analysis of root developmental zones after treatment with salt
139.099.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
138.299.9GSM184843Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with salt
126.999.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
125.899.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.044e-342At4g25780828683pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBC.G.S.X.
0.044e-342At4g14270827068-Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.C.G.S.X.
0.082e-240At3g19690821506pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBC.G.S.X.
0.037e-238At3g47680823922DNA bindingF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMOBC.G.S.X.
0.037e-238At3g29075822552glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAC.G.S.X.
0.033e-136At5g45830834623DOG1 (DELAY OF GERMINATION 1)Encodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific.C.G.S.X.
0.021e+034At5g60820836203zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-240Glycine maxHgAffx.18452.1.S1_atCA940728--1e-2At4g31470pathogenesis-related protein, putativeC.G.S.X.
0.051e-136Hordeum vulgareContig2214_s_atContig2214--8e-2At4g33730pathogenesis-related protein, putativeC.G.S.X.
0.061e-138Oryza sativaOs02g04725009630.m02589--8e-2At4g31470pathogenesis-related protein, putativeC.G.S.X.
0.056e-342Populus trichocarpaPtp.5070.1.S1_s_atCK094766hypothetical protein-4e-1At2g14580ATPRB1C.G.S.X.
0.041e+034Triticum aestivumTa.19101.1.S1_atCA647221--1e-3At4g25790allergen V5/Tpx-1-related family proteinC.G.S.X.
0.032e-238Vitis vinifera1615727_atCF205417.1hypothetical protein LOC100261981-9e-2At4g31470pathogenesis-related protein, putativeC.G.S.X.
0.055e-444Zea maysZm.17696.1.A1_atBM073027--2e-3At4g31470pathogenesis-related protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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