Gene omics information

Query gene ID At4g30460
Gene name glycine-rich protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9396.4At4g30460829169glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAS.X.H.G.
0.6781.6At1g18880838469proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PMBFOS.X.H.G.
0.6781.6At3g53980824565protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.6075.7At5g25890832658IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene.S.X.H.G.
0.5065.3At4g30450829168glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFVAS.X.H.G.
0.4457.2At2g40900818687nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BOPAMS.X.H.G.
0.4355.3At3g16340820881PDR1F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMFAPVS.X.H.G.
0.4050.8At5g43180834336unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
211.2100.0GSM142624MC002_ATH1_A1.2-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
199.7100.0GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
185.0100.0GSM142636MC002_ATH1_A5.2-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
130.899.9GSM142631MC002_ATH1_A3.3-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
124.299.9GSM142637MC002_ATH1_A5.3-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
122.399.9GSM142635MC002_ATH1_A5.1-dubos-5kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
114.399.9GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
103.999.9GSM142653MC002_ATH1_A11.1-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
102.499.9GSM142629MC002_ATH1_A3.1-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
92.999.9GSM142630MC002_ATH1_A3.2-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.073e-446At4g30450829168glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFVAC.G.S.X.
0.024e-342At4g17620827482glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOMFPVAC.G.S.X.
0.061e-240At5g16950831558unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.011e-240At1g80070844347SUS2 (ABNORMAL SUSPENSOR 2)a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality.C.G.S.X.
0.066e-238At5g46730834716glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAC.G.S.X.
0.036e-238At5g21280832258hydroxyproline-rich glycoprotein family proteinF:unknown;P:unknown;C:unknown;MPOFBVAC.G.S.X.
0.012e-136At5g07770830670formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:unknown;C:chloroplast;MPOFBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e-342Glycine maxGmaAffx.10340.1.S1_x_atCA938421--3e+0At1g05880nucleic acid binding / protein binding / structural molecule/ zinc ion bindingC.G.S.X.
0.103e-238Hordeum vulgareContig11540_s_atContig11540--3e+0At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinC.G.S.X.
0.098e-342Oryza sativaOs06g0317200AK062457.1-Glycine-rich protein (Fragment)5e-3At4g38680GRP2 (GLYCINE RICH PROTEIN 2)C.G.S.X.
0.076e-652Populus trichocarpaPtpAffx.22809.2.S1_a_atCF228627hypothetical protein-5e-6At4g30460glycine-rich proteinC.G.S.X.
0.041e+034Triticum aestivumTa.23904.1.S1_atCA735690--2e-1At1g53620unknown proteinC.G.S.X.
0.044e+030Vitis vinifera1621435_s_atCF515294hypothetical protein LOC100253802-2e+0At2g18040PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1)C.G.S.X.
0.044e-134Zea maysZmAffx.60.1.S1_atAI665094--8e-1At2g41650unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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