Gene omics information

Query gene ID At4g30440
Gene name GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At4g30440829167GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)UDP-D-glucuronate 4-epimeraseS.X.H.G.
0.3541.6At3g52800824446zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:response to chitin;C:cellular_component unknown;MPOVFS.X.H.G.
0.2930.3At1g57680842144-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POS.X.H.G.
0.2930.3At3g61580825331delta-8 sphingolipid desaturase (SLD1)F:oxidoreductase activity, sphingolipid delta-4 desaturase activity;P:lipid metabolic process;C:unknown;FMOPBVAS.X.H.G.
0.2420.7At1g64980842806unknown proteinF:unknown;P:unknown;C:cellular_component unknown;OBPS.X.H.G.
0.2319.3At2g39770818562CYT1 (CYTOKINESIS DEFECTIVE 1)Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.S.X.H.G.
0.157.8At3g56800824847CAM3 (CALMODULIN 3)encodes a calmodulinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.799.3GSM128786Somerville_1-9_stem-GC8_Rep2_ATH1GSE5533Tissue Type Arrays of Columbia-0
11.599.3E-MEXP-285-raw-cel-440782725
11.199.2E-MEXP-285-raw-cel-440782791
9.499.1E-MEXP-98-raw-cel-320188804
9.299.1GSM142655MC002_ATH1_A11.3-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.299.1GSM142653MC002_ATH1_A11.1-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
9.199.1GSM142657MC002_ATH1_A12.2-dubos-arhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
8.899.0GSM128785Somerville_1-8_stem-GC7_Rep1_ATH1GSE5533Tissue Type Arrays of Columbia-0
8.899.0GSM142654MC002_ATH1_A11.2-dubos-mxhGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
8.799.0E-MEXP-98-raw-cel-320189024
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.305e-23109At1g02000839289GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2)UDP-D-glucuronate 4-epimeraseC.G.S.X.
0.288e-22105At2g45310819139GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4)UDP-D-glucuronate 4-epimeraseC.G.S.X.
0.205e-1479At3g23820821965GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE 6)UDP-D-glucuronate 4-epimeraseC.G.S.X.
0.071e-552At4g12250826833GAE5 (UDP-D-GLUCURONATE 4-EPIMERASE 5)UDP-D-glucuronate 4-epimeraseC.G.S.X.
0.082e-448At4g00110828145GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3)Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.C.G.S.X.
0.016e-136At3g62700825444ATMRP10member of MRP subfamilyC.G.S.X.
0.013e+034At5g51630835237disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.013e+034At5g65590836685Dof-type zinc finger domain-containing proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:chloroplast;POFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.501e-61238Glycine maxGmaAffx.90954.1.S1_x_atCF806679--5e-62At4g30440GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)C.G.S.X.
0.171e-1273Hordeum vulgareContig16001_atContig16001--2e-12At4g30440GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)C.G.S.X.
0.152e-1481Oryza sativaOs02g0791500AK069596.1-Nucleotide sugar epimerase-like protein(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)2e-14At4g30440GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)C.G.S.X.
0.512e-44180Populus trichocarpaPtpAffx.77102.1.S1_atCV239221hypothetical protein-2e-44At4g30440GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)C.G.S.X.
0.133e-344Triticum aestivumTa.23083.1.S1_atCA649423--2e-3At4g30440GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)C.G.S.X.
0.163e-961Vitis vinifera1615784_atCB978373--3e-12At4g00110GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3)C.G.S.X.
0.267e-548Zea maysZm.18620.1.S1_atCO520883--1e-4At4g30440GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0009225The chemical reactions and pathways involving nucleotide-sugars, any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.
LGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
LGO:0044237The chemical reactions and pathways by which individual cells transform chemical substances.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00500Link to KEGG PATHWAYStarch and sucrose metabolism
00520Link to KEGG PATHWAYAmino sugar and nucleotide sugar metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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