Gene omics information

Query gene ID At4g30420
Gene name nodulin MtN21 family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2726.2At4g30420829165nodulin MtN21 family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;BOPAMS.X.H.G.
0.5065.3At3g01220821232ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein, its expression is auxin-inducible and dependent on MP gene activity.S.X.H.G.
0.4050.8At5g15150831367ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.S.X.H.G.
0.3643.6At3g50640824227unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.2726.2At5g01320830867pyruvate decarboxylase, putativeF:in 6 functions;P:unknown;C:cellular_component unknown;BOFPAMVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
347.5100.0GSM184895Arabidopsis, root cells, cortex, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
220.3100.0GSM184896Arabidopsis, root cells, cortex, standard conditions, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
193.5100.0GSM184897Arabidopsis, root cells, cortex, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
65.699.8GSM142755MJ001_ATH1_A6-jones-RH-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
60.199.8GSM184504Pericycle root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
58.999.8GSM142753MJ001_ATH1_A4-jones-rh2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
55.299.8GSM142732CH001_ATH1_A011-Hampt-c4cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
51.699.8GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
50.999.8GSM27361WT RootGSE680Transcript Profiling of Arabidopsis Plant Life Cycle
50.499.8GSM142733CH001_ATH1_A012-Hampt-c1cGSE6161Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.031e-138At3g28130822437nodulin MtN21 family proteinF:unknown;P:biological_process unknown;C:membrane;PBOMAC.G.S.X.
0.026e-136At5g39870833984unknown proteinF:unknown;P:unknown;C:endomembrane system;POBMAC.G.S.X.
0.016e-136At5g40470834045-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPOFBC.G.S.X.
0.016e-136At1g10300837569GTP-binding protein-relatedF:GTP binding;P:unknown;C:unknown;BOMFAPVC.G.S.X.
0.016e-136At1g59910842285formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:plasma membrane;MBOFPVAC.G.S.X.
0.012e+034At5g05260830408CYP79A2 (CYTOCHROME P450 79A2)Encodes cytochrome P450 CYP79A2.C.G.S.X.
0.022e+034At5g44220834445F-box family proteinF:unknown;P:unknown;C:unknown;PC.G.S.X.
0.012e+034At5g52340835310ATEXO70A2 (exocyst subunit EXO70 family protein A2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.C.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.028e-136Glycine maxHgAffx.19582.1.S1_atCD748271--5e+0At3g10780emp24/gp25L/p24 family proteinC.G.S.X.
0.023e-136Hordeum vulgareContig141_atContig141--9e-45At1g09200histone H3C.G.S.X.
0.024e+034Oryza sativaOs.46654.1.S1_at---0C.G.S.X.
0.118e-446Populus trichocarpaPtpAffx.214428.1.S1_atpmrna28061hypothetical protein-5e-4At4g30420nodulin MtN21 family proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.80011.1.S1_atCA704318--5e-2At1g2740060S ribosomal protein L17 (RPL17A)C.G.S.X.
0.032e-136Vitis vinifera1610377_atCF413900--5e-1At5g54410unknown proteinC.G.S.X.
0.029e-134Zea maysZm.15640.1.A1_atBM075602hypothetical protein LOC100280329-1e+0At2g10560unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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