Gene omics information

Query gene ID At4g30360
Gene name ATCNGC17
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4659.8At4g30360829159ATCNGC17member of Cyclic nucleotide gated channel familyS.X.H.G.
0.6075.7At4g25970828703PSD3 (phosphatidylserine decarboxylase 3)Encodes the major form of the two non-mitochondrail phosphatidylserine decarboxylase. Located at the ER.S.X.H.G.
0.3235.7At5g35560833521DENN (AEX-3) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPS.X.H.G.
0.1710.2At4g40050830168signal transducerF:signal transducer activity;P:biological_process unknown;C:cellular_component unknown;MPOS.X.H.G.
0.124.9At5g185252745988ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:CUL4 RING ubiquitin ligase complex;BMFOPAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.199.8GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
34.199.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
29.999.7GSM142629MC002_ATH1_A3.1-dubos-6kxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
24.599.6GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
21.299.6GSM142633MC002_ATH1_A4.2-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
21.099.6GSM142625MC002_ATH1_A1.3-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
21.099.6GSM142634MC002_ATH1_A4.3-dubos-6kcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
20.299.6GSM142627MC002_ATH1_A2.2-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
19.299.6GSM142623MC002_ATH1_A1.1-dubos-wtxGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
19.299.6GSM142628MC002_ATH1_A2.3-dubos-wtcGSE6151The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.202e-27125At2g24610816997ATCNGC14member of Cyclic nucleotide gated channel familyC.G.S.X.
0.062e-1481At4g30560829179ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9)member of Cyclic nucleotide gated channel familyC.G.S.X.
0.075e-1273At1g15990838169ATCNGC7 (CYCLIC NUCLEOTIDE GATED CHANNEL 7)member of Cyclic nucleotide gated channel familyC.G.S.X.
0.078e-1169At5g53130835393CNGC1 (CYCLIC NUCLEOTIDE GATED CHANNEL 1)member of Cyclic nucleotide gated channel familyC.G.S.X.
0.123e-1067At5g14870831339CNGC18 (CYCLIC NUCLEOTIDE-GATED CHANNEL 18)Encodes a member of the cyclic nucleotide gated channel family that is asymmetrically localized to the plasma membrane at the growing tip of the pollen tube and is involved in pollen tube growth. It likely directly transduces a cNMP signal into an ion flux that can produce a localized signal capable of regulating the pollen tip-growth machinery.C.G.S.X.
0.071e-965At1g19780838566ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8)member of Cyclic nucleotide gated channel familyC.G.S.X.
0.097e-859At5g57940835905ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5)member of Cyclic nucleotide gated channel familyC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.291e-38163Glycine maxGma.7365.1.S1_atCD412721--6e-39At4g30360ATCNGC17C.G.S.X.
0.052e-344Hordeum vulgareContig14060_atContig14060--3e-3At4g30360ATCNGC17C.G.S.X.
0.134e-1171Oryza sativaOs06g0188000AK066305.1-Cyclic nucleotide-gated channel C (Fragment)1e-11At4g30360ATCNGC17C.G.S.X.
0.318e-24113Populus trichocarpaPtpAffx.225079.1.S1_atpmrna44172hypothetical protein-5e-24At4g30360ATCNGC17C.G.S.X.
0.075e-344Triticum aestivumTa.8023.1.S1_atCA640979--4e-3At4g30360ATCNGC17C.G.S.X.
0.021e+034Vitis vinifera1612008_atCF604996hypothetical protein LOC100243222-1e+0At4g08790nitrilase, putativeC.G.S.X.
0.012e+034Zea maysZmAffx.1536.1.S1_at40794996-127--1e+1At3g61390U-box domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006811The directed movement of charged atoms or small charged molecules into, out of, within or between cells.
LGO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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