Gene omics information

Query gene ID At4g29900
Gene name ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3032.1At4g29900829112ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.S.X.H.G.
0.3133.8At2g17520816258IRE1AEncodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants.S.X.H.G.
0.2319.3At5g46410834684NLI interacting factor (NIF) family proteinF:phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MOFPBVS.X.H.G.
0.2217.5At3g19190821453-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBS.X.H.G.
0.1710.2At2g45910819199protein kinase family protein / U-box domain-containing proteinF:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;MPOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.299.8GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
32.299.7GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
25.299.6GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
25.299.6GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
20.599.6GSM205156protoplast_controlDNA_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
18.799.5GSM265474Arabidopsis, whole roots, -Fe, 72 hour, rep 2GSE10502Time course expression analysis of the iron deficiency (-Fe) response in Arabidopsis roots
17.099.5GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.
16.399.5GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.
16.099.5GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
15.799.5GSM134206Murray_3-3_D5-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.335e-53210At3g21180821671ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.C.G.S.X.
0.342e-46188At5g57110835815ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.C.G.S.X.
0.043e-861At3g57330824900ACA11 (autoinhibited Ca2+-ATPase 11)F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:chloroplast, plasma membrane, vacuole;BMOFPAVC.G.S.X.
0.041e-759At1g27770839670ACA1 (AUTO-INHIBITED CA2+-ATPASE 1)Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.C.G.S.X.
0.044e-448At4g37640829918ACA2 (CALCIUM ATPASE 2)Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.C.G.S.X.
0.052e-346At3g22910821863calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAVC.G.S.X.
0.017e-344At1g10130837550ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3)Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.193e-67258Glycine maxGma.541.1.S1_atAW156279--5e-70At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
0.168e-35149Hordeum vulgareContig25293_atContig25293--5e-52At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.172e-44182Oryza sativaOs08g0517200AK058787.1-Potential calcium-transporting ATPase 9, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9)1e-39At4g29900ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)C.G.S.X.
0.282e-37159Populus trichocarpaPtpAffx.209467.1.S1_atpmrna18776autoinhibited calcium ATPase-6e-136At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.151e-1689Triticum aestivumTa.9178.1.S1_atCD452861--7e-17At4g29900ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)C.G.S.X.
0.152e-52206Vitis vinifera1614028_atCB976052hypothetical protein LOC100259808-1e-55At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
0.141e-45184Zea maysZm.17277.1.S1_atCF273093--1e-45At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0048367The process whose specific outcome is the progression of the shoot over time, from its formation to the mature structure.
XGO:0048281The process by which the anatomical structures of inflorescences are generated and organized. Morphogenesis pertains to the creation of form. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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