Gene omics information

Query gene ID At4g29030
Gene name glycine-rich protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At4g29030829024glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAS.X.H.G.
0.5773.8At3g02210821245COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.5065.3At1g67040843024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.4050.8At4g37750829931ANT (AINTEGUMENTA)ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.S.X.H.G.
0.3338.1At2g26330817173ER (ERECTA)Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
48.299.8GSM131671ATGE_48_BGSE5633AtGenExpress: Developmental series (shoots and stems)
48.299.8GSM131672ATGE_48_CGSE5633AtGenExpress: Developmental series (shoots and stems)
44.099.8GSM131670ATGE_48_AGSE5633AtGenExpress: Developmental series (shoots and stems)
42.199.8GSM242963Steroid day 7 (day7D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
34.999.7GSM242964Steroid day 7 (day7D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
34.099.7GSM131673ATGE_49_AGSE5633AtGenExpress: Developmental series (shoots and stems)
33.099.7GSM131681ATGE_51_CGSE5633AtGenExpress: Developmental series (shoots and stems)
32.499.7GSM10441WT Ovule 1GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
31.399.7GSM131677ATGE_50_BGSE5633AtGenExpress: Developmental series (shoots and stems)
31.299.7GSM133927Weigel_2-19_CHIP-209-A_Rep1_ATH1GSE5746FRI FLC combos
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.014e-238At1g26150839156PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10)F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MBOFPVAC.G.S.X.
0.027e-134At5g40490834047RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MBOPFVAC.G.S.X.
0.027e-134At3g03440821253armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:chloroplast;PMFOBC.G.S.X.
0.027e-134At2g25940817135ALPHA-VPE (alpha-vacuolar processing enzyme)Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.C.G.S.X.
0.017e-134At2g18700816385ATTPS11Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.C.G.S.X.
0.027e-134At1g61660842462basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBFC.G.S.X.
0.013e+032At5g48410834896ATGLR1.3member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.013e+032At5g23990832464FRO5 (FERRIC REDUCTION OXIDASE 5)Encodes a ferric chelate reductase that is expressed at low levels in roots,shoots and flowers, but not cotyledons.C.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.062e-136Glycine maxGmaAffx.50212.1.S1_atBI315572bZIP transcription factor bZIP67-2e-1At4g29030glycine-rich proteinC.G.S.X.
0.043e-134Hordeum vulgareContig21607_atContig21607--2e+1At5g50710unknown proteinC.G.S.X.
0.041e+034Oryza sativaOsAffx.22515.1.S1_at---0C.G.S.X.
0.082e-136Populus trichocarpaPtpAffx.202703.1.S1_atpmrna5411hypothetical protein-2e+0At5g03837unknown proteinC.G.S.X.
0.054e-238Triticum aestivumTa.21388.1.S1_atCA675057--1e+1At5g64810WRKY51C.G.S.X.
0.042e-134Vitis vinifera1622474_atCF373640--3e+0At1g54445-C.G.S.X.
0.044e+030Zea maysZmAffx.873.1.A1_atAI770779--5e-2At4g30460glycine-rich proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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