Gene omics information

Query gene ID At4g28703
Gene name -
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g28703828989-F:molecular_function unknown;P:unknown;C:cellular_component unknown;BOPS.X.H.G.
0.9496.7At3g23220821900DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
0.9296.0At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.9095.1At1g30370839917lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMVS.X.H.G.
0.9095.1At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.9095.1At1g22810838887AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.S.X.H.G.
0.9095.1At2g37430818319zinc finger (C2H2 type) family protein (ZAT11)F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOFS.X.H.G.
0.8793.5At2g22760816806basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMAS.X.H.G.
0.8793.5At2g32140817773transmembrane receptorF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBOS.X.H.G.
0.8693.1At1g69930843329ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
289.5100.0GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
258.9100.0GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
161.299.9GSM131317AtGen_6-3321_Saltstress-Roots-3.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-238At3g11330820306leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:unknown;MPBOFAVC.G.S.X.
0.044e-238At2g45660819174AGL20 (AGAMOUS-LIKE 20)Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.C.G.S.X.
0.032e-136At5g41080834110glycerophosphoryl diester phosphodiesterase family proteinF:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.022e-136At5g63720836492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MBOFPVC.G.S.X.
0.022e-136At3g27290822348F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFC.G.S.X.
0.042e-136At3g22530821824unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PC.G.S.X.
0.026e-134At5g08139830709zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PMOFVBAC.G.S.X.
0.036e-134At3g23400821921plastid-lipid associated protein PAP / fibrillin family proteinF:structural molecule activity, transporter activity, binding;P:transport;C:in 8 components;PBOC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.104e-342Glycine maxGmaAffx.91439.1.S1_atCF807164--1e-30At3g04300-C.G.S.X.
0.043e-134Hordeum vulgareHVSMEg0015N22r2_atHVSMEg0015N22r2--1e+0At4g28703-C.G.S.X.
0.043e-136Oryza sativaOs02g0620400AK058853.1-Protein of unknown function DUF861 family protein4e-1At4g28703-C.G.S.X.
0.072e-136Populus trichocarpaPtpAffx.216090.1.S1_atpmrna30659hypothetical protein-7e-2At4g28703-C.G.S.X.
0.063e+032Triticum aestivumTaAffx.29842.1.S1_atCA634285--2e-2At2g37035unknown proteinC.G.S.X.
0.072e-134Vitis vinifera1613337_x_atCF204544.1--3e-1At4g28703-C.G.S.X.
0.067e-236Zea maysZm.4795.2.A1_x_atAI740164--2e-1At4g28703-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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