Gene omics information

Query gene ID At4g28430
Gene name reticulon family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At4g28430828960reticulon family proteinF:unknown;P:biological_process unknown;C:endoplasmic reticulum, chloroplast;MPOFS.X.H.G.
0.6277.3At1g23790838990unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFBOS.X.H.G.
0.6176.7At1g34355840337forkhead-associated domain-containing protein / FHA domain-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MBOFPAVS.X.H.G.
0.6075.7At3g58650825034unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMBFPVS.X.H.G.
0.6075.7At1g59540842245ZCF125Encodes a kinesin-like protein.S.X.H.G.
0.5974.7At1g72250843557kinesin motor protein-relatedF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVAS.X.H.G.
0.5974.7At4g17000827408unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPVS.X.H.G.
0.5974.7At1g61450842439unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5673.0At3g52110824374unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBS.X.H.G.
0.5673.0At4g03100828092rac GTPase activating protein, putativeF:Rac GTPase activator activity;P:signal transduction;C:intracellular;MOFPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
275.0100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
138.099.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
111.299.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
101.999.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
98.699.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
94.999.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
93.499.9GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
92.399.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
91.599.9GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
89.399.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.243e-31137At2g20590816582reticulon family proteinF:unknown;P:biological_process unknown;C:endoplasmic reticulum, chloroplast;MPOFBC.G.S.X.
0.022e-138At5g39570833953unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus;POC.G.S.X.
0.012e-138At4g00800828005binding / protein binding / zinc ion bindingF:protein binding, binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;OMBFPAVC.G.S.X.
0.017e-136At4g27010828809unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MFPOC.G.S.X.
0.027e-136At3g29800822695AAA-type ATPase familyF:ATPase activity, ATP binding;P:biological_process unknown;C:endomembrane system;PFMOBAVC.G.S.X.
0.027e-136At2g20613816586unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBC.G.S.X.
0.027e-136At1g65295842837unknown proteinF:unknown;P:unknown;C:endomembrane system;PC.G.S.X.
0.013e+034At5g40010833998AATP1 (AAA-ATPase 1)F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+036Glycine maxGmaAffx.58340.1.S1_atAW156364--3e+0At2g01755unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareHM08L19r_atHM08L19r--3e-2At3g09980unknown proteinC.G.S.X.
0.023e-138Oryza sativaOsAffx.22062.1.S1_at---0C.G.S.X.
0.102e-1171Populus trichocarpaPtpAffx.72161.1.A1_s_atCA925438hypothetical protein-4e-14At2g20590reticulon family proteinC.G.S.X.
0.022e-138Triticum aestivumTa.28347.1.S1_s_atCA722297--3e-1At5g20635-C.G.S.X.
0.023e+032Vitis vinifera1621888_atCD710781hypothetical protein LOC100252475-4e-1At5g39570unknown proteinC.G.S.X.
0.021e+034Zea maysZm.3153.3.S1_a_atCF624577B12D protein-1e-3At1g20440COR47 (COLD-REGULATED 47)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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