Gene omics information

Query gene ID At4g28085
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5368.6At4g28085828924unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.4457.2At4g15975827281protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:response to chitin;C:endomembrane system;MPFOVS.X.H.G.
0.3338.1At5g57220835828CYP81F2member of CYP81F, involved in glucosinolate metabolism. Mutants had impaired resistance to fungi.S.X.H.G.
0.2014.4At3g54150824582embryo-abundant protein-relatedF:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOAS.X.H.G.
0.124.9At4g21390827891B120F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVAS.X.H.G.
0.103.4At2g33710817936AP2 domain-containing transcription factor family proteinencodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
273.4100.0GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
266.2100.0GSM13783Dexamethasone plus cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
262.0100.0GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
233.2100.0GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
120.599.9GSM39213RRE2_Chitin3GSE2169rre1 and rre2 mutants
102.699.9GSM39196RRE1_Chitin2GSE2169rre1 and rre2 mutants
101.899.9GSM39212RRE2_Chitin2GSE2169rre1 and rre2 mutants
89.099.9GSM39214RRE2_Chitin4GSE2169rre1 and rre2 mutants
88.499.9GSM39195RRE1_Chitin1GSE2169rre1 and rre2 mutants
85.499.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.035e-444At5g24910832560CYP714A1member of CYP714AC.G.S.X.
0.033e-238At2g40925818690F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POC.G.S.X.
0.083e-238At1g045555007662unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMC.G.S.X.
0.011e-136At5g12150831088pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing proteinEncodes a protein with similarity to REN1, a Rho GTPase activating protein.C.G.S.X.
0.171e-136At5g57887835899unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.031e-136At5g66660836798unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POC.G.S.X.
0.021e-136At5g17540831620transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PFBOC.G.S.X.
0.021e-136At3g07050819890GTP-binding family proteinF:GTP binding;P:biological_process unknown;C:nucleolus;BMOFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-136Glycine maxGmaAffx.85644.1.A1_atCA938743--6e-2At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
0.049e-132Hordeum vulgareContig24340_atContig24340--2e-2At1g76690OPR2C.G.S.X.
0.069e-134Oryza sativaOsAffx.17451.1.S1_at---0C.G.S.X.
0.057e-134Populus trichocarpaPtpAffx.216592.1.S1_atpmrna31475SAUR family protein-4e-9At4g31320auxin-responsive protein, putative / small auxin up RNA (SAUR_C)C.G.S.X.
0.071e-136Triticum aestivumTaAffx.24874.1.S1_atCA710703--7e+0At3g09940MDHAR (MONODEHYDROASCORBATE REDUCTASE)C.G.S.X.
0.046e-132Vitis vinifera1621192_atCF516648hypothetical protein LOC100248705-4e+0At2g27920SCPL51 (SERINE CARBOXYPEPTIDASE-LIKE 51)C.G.S.X.
0.053e+030Zea maysZmAffx.1353.1.S1_at40794996-44--6e-1At5g35338-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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