Gene omics information

Query gene ID At4g27530
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g27530828862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9296.0At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8693.1At1g02700839492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFOS.X.H.G.
0.8592.4At4g21020827849late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:unknown;P:embryonic development ending in seed dormancy;C:unknown;OMBPFVAS.X.H.G.
0.8491.9At2g42560818856late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;BOMPFVAS.X.H.G.
0.8190.4At3g05260819690short-chain dehydrogenase/reductase (SDR) family proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVS.X.H.G.
0.7888.6At2g19320816449unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7888.6At5g55750835669hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBVAS.X.H.G.
0.7788.0At1g75490843885DNA binding / transcription factorencodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.S.X.H.G.
0.7788.0At3g11050820276ATFER2 (ferritin 2)F:oxidoreductase activity, ferric iron binding, binding, transition metal ion binding;P:response to oxidative stress, cellular iron ion homeostasis, response to abscisic acid stimulus, iron ion transport;C:chloroplast;MBPOAFS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
460.9100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
418.6100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
394.8100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
392.2100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
377.1100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
376.6100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
346.0100.0GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
345.7100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
319.2100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
315.1100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-136At3g03710821181RIF10 (resistant to inhibition with FSM 10)Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.C.G.S.X.
0.002e-136At1g70320843368UPL2 (UBIQUITIN-PROTEIN LIGASE 2)encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.C.G.S.X.
0.027e-134At4g01760828215DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOC.G.S.X.
0.037e-134At3g52380824403CP33chloroplast RNA-binding proteinC.G.S.X.
0.017e-134At1g71770843507PAB5 (POLY(A)-BINDING PROTEIN 5)Encodes a Class I polyA-binding protein. Expressed in floral organs. Binds polyA sepharose in vitro.C.G.S.X.
0.047e-134At1g68230843152reticulon family protein (RTNLB14)F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;PC.G.S.X.
0.037e-134At1g23580838968unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.027e-134At1g34340840335esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:cellular_component unknown;BMOFPC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Glycine maxHgAffx.5913.1.S1_atCD747901--2e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeC.G.S.X.
0.036e+030Hordeum vulgareHVSMEm0002N22r2_atHVSMEm0002N22r2--4e+0At4g17760damaged DNA binding / exodeoxyribonuclease IIIC.G.S.X.
0.056e+032Oryza sativaOsAffx.8736.1.S1_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.218228.1.S1_s_atpmrna33778hypothetical protein-8e-1At4g27530unknown proteinC.G.S.X.
0.053e+032Triticum aestivumTaAffx.27333.1.S1_atCA678145--4e-1At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyC.G.S.X.
0.049e-132Vitis vinifera1606556_atCF372538hypothetical protein LOC100249766-1e+0At4g31380FLP1 (FPF1-LIKE PROTEIN 1)C.G.S.X.
0.045e+030Zea maysZmAffx.1050.1.A1_atAI881808--3e+0At4g35025unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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