Gene omics information

Query gene ID At4g27370
Gene name VIIIB
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g27370828845VIIIBmember of Myosin-like proteinsS.X.H.G.
0.5974.7At1g69280843259unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBS.X.H.G.
0.5974.7At4g31020829229unknown proteinF:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMPFVAS.X.H.G.
0.5873.8At4g27980828911-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVS.X.H.G.
0.5570.6At5g56780835780unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5469.5At3g09550820112protein bindingF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAS.X.H.G.
0.5469.5At4g29450829066leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.5267.4At1g63640842668kinesin motor protein-relatedF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:plasma membrane;MOFPBAVS.X.H.G.
0.5166.3At3g03090821117AtVGT1 (Arabidopsis thaliana vacuolar glucose transporter 1)Encodes a vacuolar membrane-localized glucose transporter that can also transport fructose. Mutations in these gene have effects on seed germination and time to flowering.S.X.H.G.
0.5065.3At4g20880827836ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)F:unknown;P:unknown;C:nucleus;OMFBPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
280.4100.0GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
248.1100.0GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
195.0100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
156.699.9GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
133.099.9GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
121.999.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
104.299.9GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
91.999.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
87.799.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
87.199.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.5601061At5g54280835516ATM2 (ARABIDOPSIS THALIANA MYOSIN 2)Type VII myosin geneC.G.S.X.
0.023e-1481At4g33200829456XI-Imember of Myosin-like proteinsC.G.S.X.
0.103e-1481At3g19960821534ATM1 (ARABIDOPSIS THALIANA MYOSIN 1)member of Myosin-like proteinsC.G.S.X.
0.092e-1275At1g50360841458VIIIAmember of Myosin-like proteinsC.G.S.X.
0.032e-346At1g42680840876myosin-relatedF:motor activity, ATP binding;P:biological_process unknown;C:myosin complex;MOFPC.G.S.X.
0.027e-344At4g28710828991XIHmember of Myosin-like proteinsC.G.S.X.
0.014e-138At5g43900834412MYA2 (ARABIDOPSIS MYOSIN 2)Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-552Glycine maxGmaAffx.2541.1.S1_atAW156543--2e-44At3g19960ATM1 (ARABIDOPSIS THALIANA MYOSIN 1)C.G.S.X.
0.012e-138Hordeum vulgareContig26369_atContig26369--4e+0At4g02620vacuolar ATPase subunit F family proteinC.G.S.X.
0.072e-1379Oryza sativaOs07g0562800AY374514.1-Myosin heavy chain class VIII A1 protein3e-9At5g54280ATM2 (ARABIDOPSIS THALIANA MYOSIN 2)C.G.S.X.
0.251e-51206Populus trichocarpaPtpAffx.216097.1.S1_atpmrna30671hypothetical protein-5e-59At5g54280ATM2 (ARABIDOPSIS THALIANA MYOSIN 2)C.G.S.X.
0.052e+036Triticum aestivumTa.7621.1.S1_atBJ268570--1e+0At4g27370VIIIBC.G.S.X.
0.013e-240Vitis vinifera1611194_atCD718960--1e+0At2g01818zinc ion bindingC.G.S.X.
0.074e-1893Zea maysZm.17139.1.A1_atAI737374myosin VIII ZMM3-8e-43At3g19960ATM1 (ARABIDOPSIS THALIANA MYOSIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0030048Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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