Gene omics information

Query gene ID At4g27350
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3439.8At4g27350828843unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;BOPFS.X.H.G.
0.5773.8At5g56160835715transporterF:transporter activity;P:transport;C:cellular_component unknown;MPFOAS.X.H.G.
0.5570.6At1g05020839343epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;PMFOBS.X.H.G.
0.5065.3At2g29050817453ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)F:unknown;P:unknown;C:Golgi apparatus;BOMPFAS.X.H.G.
0.4659.8At2g02970814826nucleoside phosphatase family protein / GDA1/CD39 family proteinF:hydrolase activity;P:biological_process unknown;C:unknown;MFPOBS.X.H.G.
0.4355.3At2g46260819234BTB/POZ domain-containing proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVS.X.H.G.
0.4253.9At1g12450837802-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPMFAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
210.8100.0E-MEXP-285-raw-cel-440782725
152.999.9E-MEXP-285-raw-cel-440782791
145.599.9GSM239251Columbia glabrous (C24) wild type pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
136.599.9GSM239253CaMV::DME pollenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
134.899.9GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
133.099.9GSM131638ATGE_73_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
112.799.9GSM131636ATGE_73_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
109.899.9GSM154506Arabidopsis hydrated pollen grains rep2GSE6696Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
92.899.9GSM239252Columbia glabrous (C24) wild type stamenGSE9408Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
92.499.9GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.696e-68258At5g54240835512unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFC.G.S.X.
0.022e-344At2g43010818903PIF4 (phytochrome interacting factor 4)Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.C.G.S.X.
0.031e-138At2g25250817063unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PC.G.S.X.
0.021e-138At1g77690844105LAX3 (LIKE AUX1 3)Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.C.G.S.X.
0.012e+034Atcg00680--encodes for CP47, subunit of the photosystem II reaction center.C.G.S.X.
0.022e+034At5g56430835744F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.012e+034At4g27370828845VIIIBmember of Myosin-like proteinsC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Glycine maxGmaAffx.90909.1.S1_atCF806634--6e-9At3g62830AUD1C.G.S.X.
0.038e-134Hordeum vulgareEBpi01_SQ005_J19_atEBpi01_SQ005_J19--8e-1At4g27350unknown proteinC.G.S.X.
0.032e-138Oryza sativaOs07g0559400BU673850-Protein of unknown function DUF1223 family protein7e+0At5g25425glycine-rich proteinC.G.S.X.
0.092e-448Populus trichocarpaPtpAffx.216092.1.S1_s_atpmrna30663hypothetical protein-8e-21At5g54240unknown proteinC.G.S.X.
0.037e+032Triticum aestivumTaAffx.65945.1.A1_atBJ215643--3e-1At3g57050CBL (cystathionine beta-lyase)C.G.S.X.
0.023e-238Vitis vinifera1611586_atCF511910hypothetical protein LOC100250956-1e-7At1g06130GLX2-4 (glyoxalase 2-4)C.G.S.X.
0.034e-238Zea maysZmAffx.1202.1.A1_atBE128848--5e-2At4g27350unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage