Gene omics information

Query gene ID At4g26320
Gene name AGP13 (arabinogalactan protein 13)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g26320828738AGP13 (arabinogalactan protein 13)F:unknown;P:unknown;C:anchored to membrane;PS.X.H.G.
0.8693.1At5g56540835755AGP14 (ARABINOGALACTAN PROTEIN 14)Encodes arabinogalactan protein (AGP14).S.X.H.G.
0.6781.6At3g59370825106unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAS.X.H.G.
0.6075.7At4g11210826723disease resistance-responsive family protein / dirigent family proteinF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;PS.X.H.G.
0.4050.8At5g46890834734protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
302.7100.0GSM226538L8SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
191.6100.0GSM266672Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 1GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
186.9100.0GSM266674Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
182.5100.0GSM266673Arabidopsis, root cells, endodermis and quiescent center, -Fe, replicate 2GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
157.899.9GSM226549Slice7JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
150.899.9GSM226548Slice6JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
149.399.9GSM226537L7SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
148.099.9GSM226550Slice8JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
122.699.9GSM133971Birnbaum_1-1_src5-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
104.699.9GSM133988Birnbaum_1-18_wol-3_Rep3_ATH1GSE5749A gene expression map of the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.571e-652At5g56540835755AGP14 (ARABINOGALACTAN PROTEIN 14)Encodes arabinogalactan protein (AGP14).C.G.S.X.
0.112e-238At1g55330841979AGP21Encodes a putative arabinogalactan-protein (AGP21).C.G.S.X.
0.053e-134At4g18460827578D-Tyr-tRNA(Tyr) deacylase family proteinF:hydrolase activity, acting on ester bonds;P:D-amino acid catabolic process;C:cytoplasm;BOMFPAC.G.S.X.
0.093e-134At3g62790825454NADH-ubiquinone oxidoreductase-relatedF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;FPOMC.G.S.X.
0.043e-134At2g14860815975peroxisomal membrane protein 22 kDa, putativeF:unknown;P:biological_process unknown;C:integral to membrane, peroxisomal membrane;MFPOVC.G.S.X.
0.051e+032Atmg00480--Encodes subunit 8 of the mitochondrial F(O) ATP synthase complex.C.G.S.X.
0.071e+032At5g26890832747unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownC.G.S.X.
0.021e+032At5g05730830457ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.C.G.S.X.
0.031e+032At5g5025083509031 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putativeEncodes a RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.055e-134Glycine maxGmaAffx.38501.1.S1_atBU761988--2e-4At1g74230GR-RBP5 (glycine-rich RNA-binding protein 5)C.G.S.X.
0.036e-132Hordeum vulgareContig20176_atContig20176--4e-1At4g26580protein binding / zinc ion bindingC.G.S.X.
0.072e-136Oryza sativaOsAffx.20928.1.S1_at---0C.G.S.X.
0.112e+032Populus trichocarpaPtpAffx.50378.1.A1_atCV246428hypothetical protein-1e+0At4g26320AGP13 (arabinogalactan protein 13)C.G.S.X.
0.049e-236Triticum aestivumTa.14028.1.S1_atBQ804731--3e-1At4g26320AGP13 (arabinogalactan protein 13)C.G.S.X.
0.061e-134Vitis vinifera1622843_s_atCF212102--6e-2At1g11785unknown proteinC.G.S.X.
0.042e+030Zea maysZm.18379.1.A1_atCO522670hypothetical protein LOC100279886-1e+0At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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