Gene omics information

Query gene ID At4g26080
Gene name ABI1 (ABA INSENSITIVE 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5267.4At4g26080828714ABI1 (ABA INSENSITIVE 1)Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure.S.X.H.G.
0.5570.6At3g23920821975BAM1 (BETA-AMYLASE 1)Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.S.X.H.G.
0.3643.6At5g61820836304-F:molecular_function unknown;P:biological_process unknown;C:vacuole;POS.X.H.G.
0.2930.3At1g73390843674-F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PFMS.X.H.G.
0.2624.4At1g72770843609HAB1 (HOMOLOGY TO ABI1)mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2CS.X.H.G.
0.135.8At5g04760830354myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMFS.X.H.G.
0.061.4At4g30490829172AFG1-like ATPase family proteinF:ATPase activity, ATP binding;P:biological_process unknown;C:unknown;OBFMPS.X.H.G.
0.061.4At1g54100841849ALDH7B4 (Aldehyde Dehydrogenase 7B4)Aldehyde dehydrogenaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
58.399.8GSM184633Arabidopsis, whole roots, 140 mM NaCl, replicate 2GSE7636Expression analysis of the effect of protoplasting and FACS sorting in roots
58.299.8GSM184921Arabidopsis, root cells, stele, 140 mM NaCls, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
57.699.8GSM184915Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
39.799.8GSM184913Arabidopsis, root cells, cortex, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
36.999.7GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
34.799.7GSM184918Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
33.699.7GSM184912Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
33.199.7GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with salt
32.999.7GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
32.599.7GSM131297AtGen_6-2421_Osmoticstress-Roots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.582e-93343At5g57050835809ABI2 (ABA INSENSITIVE 2)Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.C.G.S.X.
0.044e-550At1g07430837255protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVC.G.S.X.
0.047e-446At1g72770843609HAB1 (HOMOLOGY TO ABI1)mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2CC.G.S.X.
0.014e-240At1g74170843757AtRLP13 (Receptor Like Protein 13)F:protein binding;P:signal transduction;C:unknown;PMOBFAVC.G.S.X.
0.042e-138At5g59220836040protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBVC.G.S.X.
0.012e-138At5g21222832244protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVAC.G.S.X.
0.012e-138At2g25620817102protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.114e-963Glycine maxGma.8038.1.S1_x_atBE821300--1e-8At1g72770HAB1 (HOMOLOGY TO ABI1)C.G.S.X.
0.043e-446Hordeum vulgareContig9585_atContig9585--5e-4At4g26080ABI1 (ABA INSENSITIVE 1)C.G.S.X.
0.053e-138Oryza sativaOs01g0583100CA757691-Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C)(Abscisic acid- insensitive 2)2e-6At1g72770HAB1 (HOMOLOGY TO ABI1)C.G.S.X.
0.161e-346Populus trichocarpaPtp.6801.1.S1_atAJ778038--3e-5At1g72770HAB1 (HOMOLOGY TO ABI1)C.G.S.X.
0.044e-240Triticum aestivumTaAffx.58269.1.S1_atCA621018--3e-4At1g72770HAB1 (HOMOLOGY TO ABI1)C.G.S.X.
0.081e-859Vitis vinifera1621497_atCB971307hypothetical protein LOC100242262-2e-3At1g72770HAB1 (HOMOLOGY TO ABI1)C.G.S.X.
0.052e-240Zea maysZm.8678.1.A1_atBM075157protein phosphatase 2C ABI2-1e-3At1g72770HAB1 (HOMOLOGY TO ABI1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009788Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by abscisic acid.
XGO:0009787Any process that modulates the frequency, rate or extent of signal transduction mediated by abscisic acid.
XGO:0009408A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
XGO:0009409A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.
XGO:0009737A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
XGO:0010119Any process that modulates the frequency, rate or extent of stomatal movement.
SGO:0006470The process of removing one or more phosphoric residues from a protein.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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