CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At4g26010

Gene name peroxidase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At4g26010 828707 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO S.X. H.G.
0.99 98.1 At4g25790 828684 allergen V5/Tpx-1-related family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBVA S.X. H.G.
0.99 98.1 At4g40090 830172 AGP3 (arabinogalactan-protein 3) F:unknown;P:multicellular organismal development;C:endomembrane system;P S.X. H.G.
0.99 98.1 At3g62680 825442 PRP3 (PROLINE-RICH PROTEIN 3) Proline-rich protein S.X. H.G.
0.96 97.3 At4g25820 828687 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) Encodes a xyloglucan endotransglycosylase with a clear preference for non-fucosylated xyloglucan polymer. S.X. H.G.
0.95 97.0 At5g19800 832100 hydroxyproline-rich glycoprotein family protein F:unknown;P:biological_process unknown;C:endomembrane system;MPOFBVA S.X. H.G.
0.95 97.0 At5g67400 836876 peroxidase 73 (PER73) (P73) (PRXR11) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO S.X. H.G.
0.95 97.0 At5g05500 830433 pollen Ole e 1 allergen and extensin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.95 97.0 At1g05240 839237 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOB S.X. H.G.
0.94 96.7 At5g35190 833473 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVA S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
96.6 99.9 GSM142750 MJ001_ATH1_A1-jones-WT1 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
94.6 99.9 GSM142751 MJ001_ATH1_A2-jones-WT2 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
76.9 99.9 GSM142754 MJ001_ATH1_A5-jones-WT-Rep3 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
54.9 99.8 GSM142730 CH001_ATH1_A009-Hampt-wsc_repeat GSE6161 Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
53.3 99.8 GSM265425 Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
48.6 99.8 GSM265422 Arabidopsis, root, longitudinal zone 3, standard conditions, rep1 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
44.7 99.8 GSM133284 RIKEN-GODA4B-M GSE5697 AtGenExpress: Comparison of plant hormone-related mutants
43.7 99.8 GSM265424 Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
42.5 99.8 GSM265431 Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
40.7 99.8 GSM133283 RIKEN-GODA4A-M GSE5697 AtGenExpress: Comparison of plant hormone-related mutants
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.45 4e-57 222 At1g34510 840353 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO C.G. S.X.
0.05 5e-4 46 At4g11290 826731 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB C.G. S.X.
0.06 3e-2 40 At5g39580 833954 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus, N-terminal protein myristoylation;C:endomembrane system;PFO C.G. S.X.
0.03 3e-2 40 At5g66780 836811 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.01 5e-1 36 At5g65500 836676 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ ubiquitin-protein ligase F:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:ubiquitin ligase complex;PMOBFVA C.G. S.X.
0.02 5e-1 36 At5g58390 835952 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
0.02 5e-1 36 At4g16270 827322 peroxidase 40 (PER40) (P40) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 7e-4 46 Glycine max Gma.5629.1.S1_at BQ740550 - - 3e-9 At5g39580 peroxidase, putative C.G. S.X.
0.03 2e-4 46 Hordeum vulgare Contig14609_at Contig14609 - - 7e-7 At3g01190 peroxidase 27 (PER27) (P27) (PRXR7) C.G. S.X.
0.03 6e-5 50 Oryza sativa Os01g0293500 9629.m01843 - - 4e-1 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
0.05 1e-2 42 Populus trichocarpa PtpAffx.225309.1.S1_at pmrna44567 hypothetical protein - 2e-1 At5g39580 peroxidase, putative C.G. S.X.
0.04 5e-4 46 Triticum aestivum Ta.14010.2.S1_at CD490639 - - 3e-4 At4g26010 peroxidase, putative C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1612012_at CF207478 hypothetical protein LOC100242215 - 7e-5 At3g04010 glycosyl hydrolase family 17 protein C.G. S.X.
0.02 3e+0 32 Zea mays ZmAffx.879.1.A1_at AI770799 - - 2e-1 At3g57720 protein kinase, putative C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00413 Peroxidase, class III

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00360 Phenylalanine metabolism
00680 Methane metabolism
00940 Phenylpropanoid biosynthesis
01061 Biosynthesis of phenylpropanoids
01100 Metabolic pathways
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage