Gene omics information

Query gene ID At4g25200
Gene name ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At4g25200828623ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrialS.X.H.G.
0.9797.6At1g16030838174Hsp70b (heat shock protein 70B)F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVAS.X.H.G.
0.9195.6At1g5354084178917.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMS.X.H.G.
0.9195.6At2g32120817771HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2)F:ATP binding;P:protein folding, response to high light intensity, response to hydrogen peroxide, response to heat;C:cellular_component unknown;OBMFPAVS.X.H.G.
0.9195.6At1g74310843771ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101)Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.S.X.H.G.
0.9195.6At2g2950081749917.6 kDa class I small heat shock protein (HSP17.6B-CI)F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAMS.X.H.G.
0.9195.6At5g12020831075HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMS.X.H.G.
0.8894.0At5g3767083374615.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)F:molecular_function unknown;P:response to heat;C:unknown;BPOFAMS.X.H.G.
0.8793.5At3g46230823768ATHSP17.4member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seedsS.X.H.G.
0.8491.9At1g0740083725217.8 kDa class I heat shock protein (HSP17.8-CI)F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAMS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
320.7100.0E-MEXP-1725-raw-cel-1669614562
262.1100.0E-MEXP-98-raw-cel-320188969
249.5100.0E-MEXP-1725-raw-cel-1669614582
248.3100.0GSM131453AtGen_6-9321_Heatstress-Roots-3.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
247.9100.0GSM131454AtGen_6-9322_Heatstress-Roots-3.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
241.1100.0E-MEXP-1725-raw-cel-1669614634
236.2100.0E-MEXP-1725-raw-cel-1669614623
223.4100.0GSM131452AtGen_6-9312_Heatstress-Shoots-3.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
210.9100.0E-MEXP-98-raw-cel-320188914
205.0100.0GSM131451AtGen_6-9311_Heatstress-Shoots-3.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.362e-21103At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMC.G.S.X.
0.023e-136At4g19700827714RINGF:protein binding, zinc ion binding;P:response to gibberellin stimulus;C:cellular_component unknown;PMOVC.G.S.X.
0.013e-136At4g21410827893protein kinase family proteinF:kinase activity;P:response to abscisic acid stimulus;C:plasma membrane, vacuole;MPOBFVAC.G.S.X.
0.023e-136At3g11310820303unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
0.021e+034At5g14440831295-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.011e+034At5g48620834919disease resistance protein (CC-NBS-LRR class), putativeF:ATP binding;P:defense response, apoptosis;C:plasma membrane;PBMOFAC.G.S.X.
0.011e+034At5g35450833508disease resistance protein (CC-NBS-LRR class), putativeF:ATP binding;P:defense response, apoptosis;C:plasma membrane;PBMOFAC.G.S.X.
0.011e+034At5g08020830696RPA70B (RPA70-KDA SUBUNIT B)Encodes a homolog of Replication Protein A. rpa70b mutants are hypersensitive to UV-B radiation and MMS treatments suggesting a role for this protein in DNA damage repair.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.137e-342Glycine maxGmaAffx.91098.1.S1_s_atCF806823Hsp23.9-6e-3At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)C.G.S.X.
0.072e-136Hordeum vulgareContig6559_atContig6559--4e-1At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)C.G.S.X.
0.046e-136Oryza sativaOsAffx.7595.1.S1_at---0C.G.S.X.
0.087e-342Populus trichocarpaPtpAffx.203015.1.S1_atpmrna5964hypothetical protein-5e-3At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)C.G.S.X.
0.063e-136Triticum aestivumTa.204.1.S1_atAF104108.1small heat shock protein Hsp23.6-5e-1At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)C.G.S.X.
0.161e-756Vitis vinifera1616889_atCB348538hypothetical protein LOC100253548-5e-7At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)C.G.S.X.
0.032e-342Zea maysZm.369.1.A1_atAF035460.1low molecular weight heat shock protein precursor-9e-3At4g25200ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0046686A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.
CGO:0009408A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage